CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PredSwiss_CON242.4
(
Pneumocystis carinii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PredSwiss_CON242.4
T334948_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_CON242.4
Sox
106
175
PKRPLSAYLSFQLKTRQAVKDSLGETATQKEILSEIAERWSKLNDDERKPFEEEARKAREQYDKEMTAYK
Links
Other
Sox
family TFs
Other
Pneumocystis carinii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PNEG_00872
Pneumocystis murina
PNEG_00872
N
0.741
PredSwiss_EST320.1
Pneumocystis carinii
PredSwiss_EST320.1
N
0.741
A1Q1_06955
Trichosporon asahii
A1Q1_06955
N
0.417
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.416
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.416