CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB03303.1
(
Alternaria brassicicola
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AB03303.1
T335157_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB03303.1
Sox
976
1053
GVNPFLLFTKDFWYTCKQECDDAHKARTGNPEAKALKQEIRNAVGLRWRTAAQEVKQPYLDQASTARGDAAASTADFR
Links
Other
Sox
family TFs
Other
Alternaria brassicicola
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SETTUDRAFT_169161
Setosphaeria turcica
SETTUDRAFT_169161
N
0.685
PTRG_07588
Pyrenophora triticirepentis
PTRG_07588
N
0.683
PTT_10530
Pyrenophora teres
PTT_10530
N
0.683
LEMA_P027240.1
Leptosphaeria maculans
LEMA_P027240.1
N
0.637
SNOG_04242
Stagonospora nodorum
SNOG_04242
N
0.630
SNOG_04242
Phaeosphaeria nodorum
SNOG_04242
N
0.630
COCC4DRAFT_190976
Bipolaris maydis
COCC4DRAFT_190976
N
0.540
COCCADRAFT_5899
Bipolaris zeicola
COCCADRAFT_5899
N
0.540
COCMIDRAFT_80709
Bipolaris oryzae
COCMIDRAFT_80709
N
0.540
COCSADRAFT_145084
Bipolaris sorokiniana
COCSADRAFT_145084
N
0.540
COCVIDRAFT_13158
Bipolaris victoriae
COCVIDRAFT_13158
N
0.540
estExt_fgenesh1_pg.C_30103
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_30103
N
0.540
W97_03398
Coniosporium apollinis
W97_03398
N
0.458
PDE_08352
Penicillium oxalicum
PDE_08352
N
0.446
GSTUM_00008430001
Tuber melanosporum
GSTUM_00008430001
N
0.437
AUEXF2481DRAFT_8302
Aureobasidium subglaciale
AUEXF2481DRAFT_8302
N
0.428
M437DRAFT_42210
Aureobasidium melanogenum
M437DRAFT_42210
N
0.428