CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshCV_pg.C_60007
(
Chlorella vulgaris
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgeneshCV_pg.C_60007
T335212_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshCV_pg.C_60007
Sox
62
131
HKRKPSAFNNYVKEKMAEIRASDNDDEDHATAIGTSIFSQAVDEWKKLSDEEKKIYAEKYKAEEGEEEGA
Links
Other
Sox
family TFs
Other
Chlorella vulgaris
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pm.C_60225
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_60225
N
0.741
estExt_fgenesh1_pm.C_110129
Coccomyxa subellipsoidea C169
estExt_fgenesh1_pm.C_110129
N
0.427