CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
D915_03061
(
Fasciola hepatica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D915_03061
T336145_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D915_03061
Sox
1
57
MLFMKDMRPRVQEECTLKESAAINQILGRKWHELPREKQAKYYEMARKEKELHHQSE
Links
Other
Sox
family TFs
Other
Fasciola hepatica
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SROB_0001994501
Schistosoma rodhaini
SROB_0001994501
I
0.550
TRE_0001036901
Trichobilharzia regenti
TRE_0001036901
I
0.529
SCUD_0001508001
Schistosoma curassoni
SCUD_0001508001
I
0.523
TCF7L2
Callithrix jacchus
ENSCJAG00000018987
I
0.512
TCF7
Homo sapiens
ENSG00000081059
D
0.512
TCF7L2
Homo sapiens
ENSG00000148737
D
0.512
PXEA_0003283501
Protopolystoma xenopodis
PXEA_0003283501
I
0.506
LotgiG119700
Lottia gigantea
LotgiG119700
I
0.501
AFAF010594
Anopheles farauti
AFAF010594
I
0.498
HelroG147401
Helobdella robusta
HelroG147401
I
0.487
Ogr17543
Ophisaurus gracilis
Ogr17543
I
0.483
MCOS_0000647601
Mesocestoides corti
MCOS_0000647601
I
0.483
csin105331
Clonorchis sinensis
csin105331
I
0.478
T265_01655
Opisthorchis viverrini
T265_01655
I
0.478
SPER_0000261701
Spirometra erinaceieuropaei
SPER_0000261701
I
0.469
Smp_125630
Schistosoma mansoni
Smp_125630
I
0.458
Sjc_0066350
Schistosoma japonicum
Sjc_0066350
I
0.458
A_07872
Schistosoma haematobium
A_07872
I
0.458
LEF1
Tupaia belangeri
ENSTBEG00000011345
I
0.444
A_02446
Schistosoma haematobium
A_02446
I
0.436
csin111647
Clonorchis sinensis
csin111647
I
0.436
D915_00291
Fasciola hepatica
D915_00291
I
0.436
SMRZ_0001315801
Schistosoma margrebowiei
SMRZ_0001315801
I
0.436
SMRZ_0001391701
Schistosoma margrebowiei
SMRZ_0001391701
I
0.436
SMTD_0001130701
Schistosoma mattheei
SMTD_0001130701
I
0.436
T265_02639
Opisthorchis viverrini
T265_02639
I
0.436
TRE_0001594201
Trichobilharzia regenti
TRE_0001594201
I
0.436
ECANG7_01705
Echinococcus canadensis
ECANG7_01705
I
0.434
HmN_000448500
Hymenolepis microstoma
HmN_000448500
I
0.434
SPER_0003790901
Spirometra erinaceieuropaei
SPER_0003790901
I
0.434
SSLN_0001416001
Schistocephalus solidus
SSLN_0001416001
I
0.434
TASK_0000085101
Taenia asiatica
TASK_0000085101
I
0.434
TsM_001099200
Taenia solium
TsM_001099200
I
0.434
TTAC_0000904301
Hydatigera taeniaeformis
TTAC_0000904301
I
0.434
SMU15009386
Schmidtea mediterranea
SMU15009386
I
0.430
Smp_131260
Schistosoma mansoni
Smp_131260
I
0.424
Ocbimv22023772m.g
Octopus bimaculoides
Ocbimv22023772m.g
I
0.417
SMU15001097
Schmidtea mediterranea
SMU15001097
I
0.417
SMU15005587
Schmidtea mediterranea
SMU15005587
I
0.417
SMU15019689
Schmidtea mediterranea
SMU15019689
I
0.417