CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_00924
(
Trichinella nativa
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D917_00924
T336155_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_00924
Sox
118
179
STAYQHYTKECFEKAGKGLKVHQAMPEFAKSWKRLSHAEKKEYESKVLQAIGEFSDSLKRWE
D917_00924
Sox
231
293
KPYRLFMHEKLKAMYKDVGDSQQHRLRSVSDQWNAMTAEERRVFKRRADQIAEAENERLDQWR
Links
Other
Sox
family TFs
Other
Trichinella nativa
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV57784
Trichinella spiralis
EFV57784
N
0.713