CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ECPE_0001729301
(
Echinostoma caproni
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
ECPE_0001729301
T336269_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ECPE_0001729301-mRNA-1
Sox
47
114
PRKPLTAFMLFMKARRSSSEYVASLPFKERNRLLGAEWSELPKDEKQAYCSKAAEEREKYKVLLAEYK
Links
Other
Sox
family TFs
Other
Echinostoma caproni
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
T265_15292
Opisthorchis viverrini
T265_15292
N
0.569
csin108146
Clonorchis sinensis
csin108146
N
0.541
Smp_173650
Schistosoma mansoni
Smp_173650
I
0.437
Sjc_0021990
Schistosoma japonicum
Sjc_0021990
I
0.437
A_02303
Schistosoma haematobium
A_02303
I
0.437
SCUD_0001691501
Schistosoma curassoni
SCUD_0001691501
I
0.437
SMRZ_0000758001
Schistosoma margrebowiei
SMRZ_0000758001
I
0.437
SMTD_0001766201
Schistosoma mattheei
SMTD_0001766201
I
0.437
SROB_0001231001
Schistosoma rodhaini
SROB_0001231001
I
0.437