maker-nMf.1.1.scaf13199-snap-gene-0.7 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 maker-nMf.1.1.scaf13199-snap-gene-0.7 T336597_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf13199-snap-gene-0.7-mRNA-1 Sox 18 84

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc02713 Meloidogyne incognita Minc02713 N 0.714
MhA1_Contig334.frz3.gene35 Meloidogyne hapla MhA1_Contig334.frz3.gene35 N 0.610
augustus_masked-nMf.1.1.scaf30002-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf30002-processed-gene-0.0 N 0.565
snap_masked-nMf.1.1.scaf09884-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf09884-processed-gene-0.3 N 0.565