CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0001526701
(
Trichobilharzia regenti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TRE_0001526701
T337212_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001526701-mRNA-1
Sox
11
78
PRRPLSAFNLFMRKRRQESEAIASKPFGERNRIVSAEWANLSVEDRQMYTDQAAEARESYKKLFAEYK
Links
Other
Sox
family TFs
Other
Trichobilharzia regenti
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0021990
Schistosoma japonicum
Sjc_0021990
I
0.580
Smp_173650
Schistosoma mansoni
Smp_173650
I
0.573
A_02303
Schistosoma haematobium
A_02303
I
0.573
SMRZ_0000758001
Schistosoma margrebowiei
SMRZ_0000758001
I
0.573
SMTD_0001766201
Schistosoma mattheei
SMTD_0001766201
I
0.573
SROB_0001231001
Schistosoma rodhaini
SROB_0001231001
I
0.573
SCUD_0001691501
Schistosoma curassoni
SCUD_0001691501
I
0.546
DILT_0001682001
Diphyllobothrium latum
DILT_0001682001
N
0.521