CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000577501
(
Trichuris trichiura
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
TTRE_0000577501
T337270_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000577501
Sox
1
54
MPIIAAAHPALSPQEVLQLTSSSWKSLVSEKRLEYQTRAKQLWDEYLEARNDYV
Links
Other
Sox
family TFs
Other
Trichuris trichiura
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D918_04644
Trichuris suis
D918_04644
N
0.578
XP_002160709.1
Hydra magnipapillata
XP_002160709.1
N
0.429
UCREL1_11534
Eutypa lata
UCREL1_11534
N
0.427