CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.26326s0088
(
Boechera stricta
)
Storekeeper
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04504 (DUF573)
IPR007592
Bostr.26326s0088
T338937_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GEBP
M02493_2.00
Arabidopsis thaliana
KCGGCCGD
HCGGCCGM
PBM
Weirauch et al.(2014)
pTH7529
0.806
0.806
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26326s0088.1.p
Storekeeper
62
154
PIWNEEDELAVLKGLVDYRAKSGFQTKINWDAFYRFLGGSIVAKFSNDQVLSKIRKLKRRFLVHWEKIIEGNDPKFTRSSDSEAFGFSMMIWG
Links
Other
Storekeeper
family TFs
Other
Boechera stricta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPL1
Arabidopsis thaliana
AT2G25650
I
0.832
GEBP
Arabidopsis thaliana
AT4G00270
D
0.806
Bostr.2902s0164
Boechera stricta
Bostr.2902s0164
I
0.806
Cagra.3166s0035
Capsella grandiflora
Cagra.3166s0035
I
0.779
Cagra.8436s0001
Capsella grandiflora
Cagra.8436s0001
I
0.779
Carubv10025028m.g
Capsella rubella
Carubv10025028m.g
I
0.779
Al_scaffold_0004_661
Arabidopsis lyrata
Al_scaffold_0004_661
I
0.731
Bostr.5022s0117
Boechera stricta
Bostr.5022s0117
N
0.720