CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG15132
(
Caenorhabditis briggsae
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
CBG15132
T339348_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tbx-43
M00716_2.00
Caenorhabditis elegans
NRGGTGTBAH
DTVACACCYN
PBM
Narasimhan et al.(2015)
pTH10927
0.818
0.795
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG15132
T-box
8
186
VALMEKALWKEFDDHRNEMIITKIGRNLFPILEFAFKGLIEHQMYRIGITMEPTIFQKLKFTAGRWEKLDILEDLITTNEVFFVKSGRELLHRGLKLEKLKLTNSKDAVQKNDQMIRVQSMRQYIPILNIYEDLPNGAHMQIGKYKFTETKFIAVTAYQSEKVKNLKVQKNKFAQGFRE
Links
Other
T-box
family TFs
Other
Caenorhabditis briggsae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
tbx-43
Caenorhabditis elegans
WBGene00044798
D
0.818
CBN03038
Caenorhabditis brenneri
CBN03038
I
0.814
CBN07935
Caenorhabditis brenneri
CBN07935
I
0.814
CRE02349
Caenorhabditis remanei
CRE02349
I
0.798
CJA16730
Caenorhabditis japonica
CJA16730
I
0.772