CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
tbx6b
(
Ciona intestinalis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSCING00000003112
T339687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000006296
T-box
101
282
VHLHDRQLWDSFSAAQTEMIVTKTGRRMFPGYRVKMSGMDPNAQYCVLMDISSVDENRYKFQHGEWVVAGRGEPQVPQRFYLHPNSPCSGQQWMKEIISFHKVKLTNSCGNSADGKFLIHSMHRYQPRIHIVRTDDVNTLHLQPMSTFAFPQTVFVTVTAYQNHEVTKLKINNNPFARGFRS
Links
Other
T-box
family TFs
Other
Ciona intestinalis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAVG00000011647
Ciona savignyi
ENSCSAVG00000011647
N
0.909
ENSCING00000023066
Ciona intestinalis
ENSCING00000023066
N
0.845
ENSCSAVG00000011649
Ciona savignyi
ENSCSAVG00000011649
N
0.823
ENSCSAVG00000011655
Ciona savignyi
ENSCSAVG00000011655
N
0.793
ENSCSAVG00000008301
Ciona savignyi
ENSCSAVG00000008301
N
0.786
ENSCSAVG00000011654
Ciona savignyi
ENSCSAVG00000011654
N
0.784
ENSCSAVG00000011646
Ciona savignyi
ENSCSAVG00000011646
N
0.774
tbx6a
Ciona intestinalis
ENSCING00000020186
N
0.758
ENSCSAVG00000011650
Ciona savignyi
ENSCSAVG00000011650
N
0.757