ENSLOCG00000002370 (Lepisosteus oculatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSLOCG00000002370 T340006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.758 0.731
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.758 0.731
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.758 0.731
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.758 0.731
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.758 0.731
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.758 0.731
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.758 0.731
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.758 0.731
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.758 0.731
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000002786 T-box 151 327

Links

Other T-box family TFs
Other Lepisosteus oculatus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000020444 Astyanax mexicanus ENSAMXG00000020444 I 0.760
tbx1 Danio rerio ENSDARG00000031891 I 0.760
ENSFALG00000008041 Ficedula albicollis ENSFALG00000008041 I 0.760
tbx1 Gasterosteus aculeatus ENSGACG00000013057 I 0.760
ENSGMOG00000018613 Gadus morhua ENSGMOG00000018613 I 0.760
ENSLACG00000016333 Latimeria chalumnae ENSLACG00000016333 I 0.760
ENSMEUG00000011624 Macropus eugenii ENSMEUG00000011624 I 0.760
TBX1 Monodelphis domestica ENSMODG00000021176 I 0.760
ENSONIG00000015827 Oreochromis niloticus ENSONIG00000015827 I 0.760
tbx1 Oryzias latipes ENSORLG00000015256 I 0.760
ENSPFOG00000009540 Poecilia formosa ENSPFOG00000009540 I 0.760
ENSPFOG00000009621 Poecilia formosa ENSPFOG00000009621 I 0.760
TBX1 Taeniopygia guttata ENSTGUG00000008395 I 0.760
tbx1 Tetraodon nigroviridis ENSTNIG00000016767 I 0.760
tbx1 Takifugu rubripes ENSTRUG00000014017 I 0.760
Pvit_15846 Pogona vitticeps Pvit_15846 I 0.760
tbx1 Xenopus tropicalis XB-GENE-478084 I 0.760
tbx1.L Xenopus laevis XB-GENE-478088 I 0.760
tbx1.S Xenopus laevis XB-GENE-6254396 I 0.760
TBX1 Callithrix jacchus ENSCJAG00000014591 I 0.758
ENSCSAG00000011818 Chlorocebus sabaeus ENSCSAG00000011818 I 0.758
TBX1 Dasypus novemcinctus ENSDNOG00000035422 I 0.758
ENSFCAG00000005446 Felis catus ENSFCAG00000005446 I 0.758
TBX1 Homo sapiens ENSG00000184058 D 0.758
ENSGGOG00000009181 Gorilla gorilla ENSGGOG00000009181 I 0.758
TBX1 Loxodonta africana ENSLAFG00000021555 I 0.758
Tbx1 Mus musculus ENSMUSG00000009097 D 0.758
ENSPANG00000015763 Papio anubis ENSPANG00000015763 I 0.758
Tbx1 Rattus norvegicus ENSRNOG00000001892 I 0.758
ENSSTOG00000004505 Ictidomys tridecemlineatus ENSSTOG00000004505 I 0.758
ENSP00000331791-D2 Bos grunniens ENSP00000331791-D2 I 0.758
TBX1 Otolemur garnettii ENSOGAG00000003596 I 0.755
ENSMPUG00000003900 Mustela putorius furo ENSMPUG00000003900 I 0.736