CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TBX6
(
Ochotona princeps
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSOPRG00000009784
T340264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX6
M05805_2.00
Homo sapiens
NRSGTGTBAN
NTVACACSYN
SELEX
Yin et al.(2017)
TBX6_eDBD_HT-SELEX
0.862
0.961
TBX6
M05806_2.00
Homo sapiens
NTVRCACBHN
NDVGTGYBAN
SELEX
Yin et al.(2017)
TBX6_eDBD_Methyl-HT-SELEX
0.862
0.961
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.735
0.608
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.735
0.608
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000008934
T-box
94
274
LSLENQELWKQFSSVGTEMIITKAGRRMFPACRVSVSGLDPEARYLFLLDVVPVDGARYRWQGRRWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRAAQLCSQHWGGVASFRFPETMFISVTAYQNPRITQLKIAANPFAKGFRE
Links
Other
T-box
family TFs
Other
Ochotona princeps
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TBX6
Oryctolagus cuniculus
ENSOCUG00000026026
I
0.893
TBX6
Cavia porcellus
ENSCPOG00000021165
I
0.893
ENSSTOG00000000869
Ictidomys tridecemlineatus
ENSSTOG00000000869
I
0.893
ENSNLEG00000002044
Nomascus leucogenys
ENSNLEG00000002044
I
0.890
TBX6
Macaca mulatta
ENSMMUG00000000981
I
0.890
ENSPPYG00000007242
Pongo abelii
ENSPPYG00000007242
I
0.890
TBX6
Pan troglodytes
ENSPTRG00000007985
I
0.890
TBX6
Microcebus murinus
ENSMICG00000009134
I
0.890
TBX6
Otolemur garnettii
ENSOGAG00000011659
I
0.890
ENSPANG00000000556
Papio anubis
ENSPANG00000000556
I
0.890
ENSCSAG00000006175
Chlorocebus sabaeus
ENSCSAG00000006175
I
0.890
TBX6
Callithrix jacchus
ENSCJAG00000035904
I
0.890
TBX6
Gorilla gorilla
ENSGGOG00000012924
I
0.890
Tbx6
Mus musculus
ENSMUSG00000030699
I
0.889
Tbx6
Rattus norvegicus
ENSRNOG00000019771
I
0.889
ENSOARG00000004040
Ovis aries
ENSOARG00000004040
I
0.880
TBX6
Myotis lucifugus
ENSMLUG00000011244
I
0.880
Myotis_brandtii_TBX6_10014444
Myotis brandtii
Myotis_brandtii_TBX6_10014444
I
0.880
ENSBTAP00000011919-D1
Bos grunniens
ENSBTAP00000011919-D1
I
0.877
TBX6
Equus caballus
ENSECAG00000022374
I
0.877
TBX6
Bos taurus
ENSBTAG00000009046
I
0.877
ENSEEUG00000012843
Erinaceus europaeus
ENSEEUG00000012843
I
0.877
TBX6
Loxodonta africana
ENSLAFG00000017884
I
0.877
ENSMPUG00000012586
Mustela putorius furo
ENSMPUG00000012586
I
0.877
TBX6
Procavia capensis
ENSPCAG00000000071
I
0.875
TBX6
Monodelphis domestica
ENSMODG00000015682
I
0.868
TBX6
Felis catus
ENSFCAG00000014172
I
0.867
TBX6
Echinops telfairi
ENSETEG00000019233
I
0.863
TBX6
Homo sapiens
ENSG00000149922
D
0.862
TBX6
Pteropus vampyrus
ENSPVAG00000010556
I
0.847
TBX6
Tursiops truncatus
ENSTTRG00000005534
I
0.821
GH16540
Drosophila grimshawi
FBgn0124011
I
0.738
T265_12717
Opisthorchis viverrini
T265_12717
I
0.737
csin100383
Clonorchis sinensis
csin100383
I
0.737
GA18655
Drosophila pseudoobscura
FBgn0078655
I
0.735
Doc3
Drosophila melanogaster
FBgn0035954
D
0.735
GE20799
Drosophila yakuba
FBgn0238093
I
0.735
GD14148
Drosophila simulans
FBgn0185836
I
0.735
GG14368
Drosophila erecta
FBgn0106627
I
0.735
GL15033
Drosophila persimilis
FBgn0152637
I
0.735
GM25112
Drosophila sechellia
FBgn0179973
I
0.735
GF24374
Drosophila ananassae
FBgn0101368
I
0.735
GK12352
Drosophila willistoni
FBgn0214362
I
0.735