CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL012563
(
Heliconius melpomene
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
HMEL012563
T340755_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Doc3
M03990_2.00
Drosophila melanogaster
NRGGTGTBAD
HTVACACCYN
SELEX
Nitta et al.(2015)
Doc3_1
0.762
0.632
Doc3
M03991_2.00
Drosophila melanogaster
DAGGTGTBAN
NTVACACCTH
SELEX
Nitta et al.(2015)
Doc3_2
0.762
0.632
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL012563-PA
T-box
41
222
ARLLNGELWRRFHDIGTEMIITKGGRRMFPSLRVSLNGLDPREEYCVLLELSLVGRRRWRWAGGSWAAAGGAEPQSPRRLMMHPDSPAPGHHWTANPVSFSKLKLTNNTMDAQGHMVLTSMHKYRPRVLVVRARDAAALAWGAPHASFSFAETEFIAVTAYQNDRITKLKIDNNPFAKGFRA
Links
Other
T-box
family TFs
Other
Heliconius melpomene
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GK12352
Drosophila willistoni
FBgn0214362
I
0.770
Doc3
Drosophila melanogaster
FBgn0035954
D
0.762
GA18655
Drosophila pseudoobscura
FBgn0078655
I
0.762
GF24374
Drosophila ananassae
FBgn0101368
I
0.762
GG14368
Drosophila erecta
FBgn0106627
I
0.762
GI13829
Drosophila mojavensis
FBgn0136583
I
0.762
GL15033
Drosophila persimilis
FBgn0152637
I
0.762
GM25112
Drosophila sechellia
FBgn0179973
I
0.762
GD14148
Drosophila simulans
FBgn0185836
I
0.762
GE20799
Drosophila yakuba
FBgn0238093
I
0.762
GJ11695
Drosophila virilis
FBgn0198949
I
0.761
GH16540
Drosophila grimshawi
FBgn0124011
I
0.738
GI13831
Drosophila mojavensis
FBgn0136585
I
0.738
MDOA003812
Musca domestica
MDOA003812
I
0.737
GH14955
Drosophila grimshawi
FBgn0122430
I
0.735