LotgiG179359 (Lottia gigantea)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 LotgiG179359 T340810_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.798 0.808
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.798 0.808
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.798 0.808
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.798 0.808
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.798 0.808
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.798 0.808
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.798 0.808
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.798 0.808
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.798 0.808
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.798 0.808
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.798 0.808
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.798 0.808
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.798 0.808
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.798 0.808
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.798 0.808
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.798 0.808
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.798 0.808
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP179359 T-box 6 195

Links

Other T-box family TFs
Other Lottia gigantea TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LotgiG129083 Lottia gigantea LotgiG129083 I 0.809
Ocbimv22004458m.g Octopus bimaculoides Ocbimv22004458m.g I 0.807
D915_09218 Fasciola hepatica D915_09218 I 0.807
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.805
TBX20 Canis familiaris ENSCAFG00000028536 I 0.802
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.798
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.798
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.798
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.798
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.798
TBX20 Equus caballus ENSECAG00000018182 I 0.798
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.798
TBX20 Echinops telfairi ENSETEG00000012771 I 0.798
TBX20 Felis catus ENSFCAG00000013004 I 0.798
TBX20 Homo sapiens ENSG00000164532 D 0.798
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.798
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.798
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.798
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.798
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.798
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.798
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.798
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.798
Tbx20 Mus musculus ENSMUSG00000031965 D 0.798
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.798
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.798
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.798
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.798
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.798
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.798
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.798
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.798
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.798
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.798
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.798
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.798
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.798
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.798
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.798
TBX20 Bos taurus ENSBTAG00000017541 I 0.797
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.797
TBX20 Sus scrofa ENSSSCG00000016662 I 0.797
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.797
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.796
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.796
tbx20 Danio rerio ENSDARG00000005150 I 0.793
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.793
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.793
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.792
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.792
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.792
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.792
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.792
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.792
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.792
tbx20.L Xenopus laevis XB-GENE-865696 I 0.792
tbx20 Ciona intestinalis ENSCING00000005267 I 0.790
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.790
L798_07505 Zootermopsis nevadensis L798_07505 I 0.790
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.790
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.786
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.785
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.783
Smp_003900 Schistosoma mansoni Smp_003900 I 0.782
HelroG98030 Helobdella robusta HelroG98030 I 0.780
Sjc_0040480 Schistosoma japonicum Sjc_0040480 I 0.780
SMU15033270 Schmidtea mediterranea SMU15033270 I 0.779
csin100383 Clonorchis sinensis csin100383 I 0.777
T265_12717 Opisthorchis viverrini T265_12717 I 0.777
HelroG134299 Helobdella robusta HelroG134299 I 0.775
NV17866 Nasonia vitripennis NV17866 I 0.771
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.770
SMAR015389 Strigamia maritima SMAR015389 I 0.765
SMAR008438 Strigamia maritima SMAR008438 I 0.762
EmuJ_000377200 Echinococcus multilocularis EmuJ_000377200 I 0.753
HDID_0000627201 Hymenolepis diminuta HDID_0000627201 I 0.753
HmN_000695600 Hymenolepis microstoma HmN_000695600 I 0.753
HMEL012426 Heliconius melpomene HMEL012426 I 0.752
NV17864 Nasonia vitripennis NV17864 I 0.752
TC014296 Tribolium castaneum TC014296 I 0.752
GF14390 Drosophila ananassae FBgn0091417 I 0.751
GI17985 Drosophila mojavensis FBgn0140725 I 0.751
GJ19565 Drosophila virilis FBgn0206707 I 0.751
HNAJ_0000047101 Hymenolepis nana HNAJ_0000047101 I 0.751
DAPPUDRAFT_59366 Daphnia pulex DAPPUDRAFT_59366 I 0.749
GL25841 Drosophila persimilis FBgn0163425 I 0.748
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.748
MCOS_0000012101 Mesocestoides corti MCOS_0000012101 I 0.747
H15 Drosophila melanogaster FBgn0016660 I 0.745
GG25071 Drosophila erecta FBgn0117200 I 0.745
GK15084 Drosophila willistoni FBgn0217089 I 0.745
GE25406 Drosophila yakuba FBgn0242479 I 0.745
ECANG7_07504 Echinococcus canadensis ECANG7_07504 I 0.745
tetur32g01390 Tetranychus urticae tetur32g01390 I 0.744
tetur32g01430 Tetranychus urticae tetur32g01430 I 0.744
GB45715 Apis mellifera GB45715 I 0.741
GM18547 Drosophila sechellia FBgn0173454 I 0.740
GD23340 Drosophila simulans FBgn0194726 I 0.740
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.736