SNAPOd2T00011568001 (Oikopleura dioica)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 SNAPOd2T00011568001 T341262_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.769 0.703
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.769 0.703
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.769 0.703
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.769 0.703
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.769 0.703
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.769 0.703
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.769 0.703
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.769 0.703
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.766 0.698
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.766 0.698
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.766 0.698
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.766 0.698
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.766 0.698
XP_008203914.1
M01029_2.00 		Nasonia vitripennis
AGGTGTBA
TVACACCT		 PBM
SebePedros et al.(2013)
pTH9336 		0.756 0.670
TBX2
M02495_2.00 		Gasterosteus aculeatus
NNVDCACNHN
NDNGTGHBNN		 PBM
Weirauch et al.(2014)
pTH9182 		0.745 0.692
TBX2
M02496_2.00 		Takifugu rubripes
DAGGTGTBRN
NYVACACCTH		 PBM
Weirauch et al.(2014)
pTH9289 		0.745 0.687
estExt_fgenesh2_pg.C_1570024
M01030_2.00 		Branchiostoma floridae
NHNDCACNHN
NDNGTGHNDN		 PBM
SebePedros et al.(2013)
pTH9244 		0.745 0.648
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00011568001 T-box 53 236

Links

Other T-box family TFs
Other Oikopleura dioica TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LotgiG116991 Lottia gigantea LotgiG116991 I 0.793
tbx2b Gasterosteus aculeatus ENSGACG00000020309 I 0.792
ENSCING00000008678 Ciona intestinalis ENSCING00000008678 I 0.787
ENSCSAVG00000009650 Ciona savignyi ENSCSAVG00000009650 I 0.787
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I 0.787
NEMVEDRAFT_v1g102530 Nematostella vectensis NEMVEDRAFT_v1g102530 I 0.776
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.775
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I 0.772
tbx3a Danio rerio ENSDARG00000002216 I 0.772
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I 0.772
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I 0.772
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I 0.772
tbx3a Oryzias latipes ENSORLG00000007316 I 0.772
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I 0.772
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I 0.772
tbx3a Takifugu rubripes ENSTRUG00000015097 I 0.772
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I 0.772
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I 0.772
EFV62265 Trichinella spiralis EFV62265 I 0.771
LotgiG117095 Lottia gigantea LotgiG117095 I 0.771
D917_09589 Trichinella nativa D917_09589 I 0.771
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.769
TBX2 Bos taurus ENSBTAG00000014278 I 0.769
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.769
tbx2a Danio rerio ENSDARG00000018025 I 0.769
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.769
TBX2 Homo sapiens ENSG00000121068 D 0.769
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.769
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.769
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.769
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.769
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.769
TBX2 Microcebus murinus ENSMICG00000016649 I 0.769
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.769
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.769
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.769
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.769
Tbx2 Mus musculus ENSMUSG00000000093 D 0.769
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.769
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.769
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.769
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.769
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.769
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.769
TBX2 Sus scrofa ENSSSCG00000027060 I 0.769
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.769
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.769
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.769
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.769
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.769
AAI57537 Xenopus tropicalis AAI57537 I 0.769
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.769
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.769
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.767
tbx2b Danio rerio ENSDARG00000006120 I 0.767
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.766
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.766
TBX3 Bos taurus ENSBTAG00000021706 I 0.766
TBX3 Canis familiaris ENSCAFG00000009216 I 0.766
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.766
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.766
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.766
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.766
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.766
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.766
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.766
TBX3 Homo sapiens ENSG00000135111 D 0.766
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.766
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.766
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.766
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.766
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.766
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.766
TBX3 Microcebus murinus ENSMICG00000010947 I 0.766
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.766
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.766
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.766
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.766
Tbx3 Mus musculus ENSMUSG00000018604 D 0.766
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.766
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.766
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.766
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.766
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.766
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.766
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.766
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.766
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.766
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.766
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.766
TBX3 Sus scrofa ENSSSCG00000009865 I 0.766
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.766
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.766
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.766
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.766
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.766
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.766
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.766
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.766
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.766
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.766
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.766
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.766
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.766
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.766
tbx2b Takifugu rubripes ENSTRUG00000009981 I 0.764
LotgiG117236 Lottia gigantea LotgiG117236 I 0.764
tbx2b Tetraodon nigroviridis ENSTNIG00000010765 I 0.763
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.763
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I 0.763
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.762
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I 0.762
tbx2b Oryzias latipes ENSORLG00000010011 I 0.761
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.758
AAEL018223 Aedes aegypti AAEL018223 I 0.757
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.757
CapteG163410 Capitella teleta CapteG163410 I 0.757
bi Drosophila melanogaster FBgn0000179 I 0.757
bi Drosophila virilis FBgn0020983 I 0.757
GL14298 Drosophila persimilis FBgn0151903 I 0.757
GM12345 Drosophila sechellia FBgn0167282 I 0.757
GK15734 Drosophila willistoni FBgn0217737 I 0.757
GE16345 Drosophila yakuba FBgn0233875 I 0.757
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.757
tetur33g01070 Tetranychus urticae tetur33g01070 I 0.757
CapteG152028 Capitella teleta CapteG152028 I 0.756
GB49684 Apis mellifera GB49684 I 0.756
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D 0.756
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.753
SPU_023386 Strongylocentrotus purpuratus SPU_023386 I 0.753
HelroG63904 Helobdella robusta HelroG63904 I 0.752
ECANG7_08267 Echinococcus canadensis ECANG7_08267 I 0.750
EmuJ_000247100 Echinococcus multilocularis EmuJ_000247100 I 0.750
TsM_000101300 Taenia solium TsM_000101300 I 0.750
D918_00588 Trichuris suis D918_00588 I 0.748
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.748
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.748
tbx3b Danio rerio ENSDARG00000061509 I 0.746
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.745
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.745
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.745
TBX2 Oryzias latipes ENSORLG00000014792 I 0.745
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.745
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.745
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.745
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D 0.745
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I 0.745
TriadG59753 Trichoplax adhaerens TriadG59753 I 0.742
SMU15026199 Schmidtea mediterranea SMU15026199 I 0.742
Smp_163240 Schistosoma mansoni Smp_163240 I 0.741