CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000536001
(
Ascaris lumbricoides
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
ALUE_0000536001
T341576_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000536001-mRNA-1
T-box
63
232
VELDDKQLWDQFCSCGTEMVITKSGRRIFPAFKVKLSGLDKRSKYILLMDIVPADECRYKFHNSRWMVAGKADPEMPKRMYIHPDSPANGEHWMAKGANFHKLKLTNNISDKHGFTILNSMHKYQPRLHVVRCAELINLPYSTFRTFVFKETEFIAVTAYQNEKVGTLLP
Links
Other
T-box
family TFs
Other
Ascaris lumbricoides
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R014902
Calypte anna
Aan_R014902
I
0.811
TBX3
Felis catus
ENSFCAG00000024116
N
0.788
ENSMEUG00000013490
Macropus eugenii
ENSMEUG00000013490
N
0.788
TBX3
Pteropus vampyrus
ENSPVAG00000008090
I
0.788
HPBE_0002342901
Heligmosomoides bakeri
HPBE_0002342901
N
0.788
ENSGMOG00000010377
Gadus morhua
ENSGMOG00000010377
N
0.776
ENSPSIG00000004533
Pelodiscus sinensis
ENSPSIG00000004533
N
0.765
ASU_08095
Ascaris suum
ASU_08095
I
0.740