D917_05246 (Trichinella nativa)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 D917_05246 T341649_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mid
M03994_2.00 		Drosophila melanogaster
DAGGTGTKAN
NTMACACCTH		 SELEX
Nitta et al.(2015)
mid_1 		0.782 0.714
Tbx20
M00835_2.00 		Mus musculus
NRRGTGTBAN
NTVACACYYN		 PBM
Weirauch et al.(2013)
pTH3777 		0.761 0.736
TBX20
M03565_2.00 		Homo sapiens
AGGTGTKARVGYGTGA
TCACRCBYTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_1 		0.761 0.736
TBX20
M03566_2.00 		Homo sapiens
AGGTGTGAAWDTSACACBT
AVGTGTSAHWTTCACACCT		 SELEX
Jolma et al.(2013)
TBX20_2 		0.761 0.736
TBX20
M03567_2.00 		Homo sapiens
NNNDAGGTGTGAAND
HNTTCACACCTHNNN		 SELEX
Jolma et al.(2013)
TBX20_3 		0.761 0.736
TBX20
M03568_2.00 		Homo sapiens
DAGGTGTGAWR
YWTCACACCTH		 SELEX
Jolma et al.(2013)
TBX20_4 		0.761 0.736
TBX20
M03569_2.00 		Homo sapiens
AGGTGTKANGKTGTSA
TSACAMCNTMACACCT		 SELEX
Jolma et al.(2013)
TBX20_5 		0.761 0.736
TBX20
M05813_2.00 		Homo sapiens
DAGGTGTKARSGTGTGAA
TTCACACSYTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_1 		0.761 0.736
TBX20
M05814_2.00 		Homo sapiens
NAGGTGTGAAWTTCACACCTN
NAGGTGTGAAWTTCACACCTN		 SELEX
Yin et al.(2017)
TBX20_eDBD_HT-SELEX_2 		0.761 0.736
TBX20
M05817_2.00 		Homo sapiens
DRRGTGTBADVGYGTBAN
NTVACRCBHTVACACYYH		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_1 		0.761 0.736
TBX20
M05818_2.00 		Homo sapiens
WTCACACYTAGGTGTKAM
KTMACACCTARGTGTGAW		 SELEX
Yin et al.(2017)
TBX20_FL_HT-SELEX_2 		0.761 0.736
Tbx20
M09430_2.00 		Mus musculus
NDSTGNTGACAGSN
NSCTGTCANCASHN		 Misc
Kulakovskiy et al.(2013)
TBX20_MOUSE.H11MO.0.C 		0.761 0.736
Tbx20
M09650_2.00 		Mus musculus
SCTGTCADCASN
NSTGHTGACAGS		 Misc
Heinz et al.(2010)
Heart-Tbx20_GSE29636 		0.761 0.736
TBX20
M11385_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX20_05 		0.761 0.736
TBX20
M05815_2.00 		Homo sapiens
DAGGTGTKAASGYGTKAA
TTMACRCSTTMACACCTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_1 		0.761 0.736
TBX20
M05816_2.00 		Homo sapiens
DASGTGTGAWWWTCACACCTH
DAGGTGTGAWWWTCACACSTH		 SELEX
Yin et al.(2017)
TBX20_eDBD_Methyl-HT-SELEX_2 		0.761 0.736
TBX20
M05819_2.00 		Homo sapiens
DRGGYGTBARVGYGTKAN
NTMACRCBYTVACRCCYH		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_1 		0.761 0.736
TBX20
M05820_2.00 		Homo sapiens
TTMACRCCTAVGTGTGAA
TTCACACBTAGGYGTKAA		 SELEX
Yin et al.(2017)
TBX20_FL_Methyl-HT-SELEX_2 		0.761 0.736
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D917_05246 T-box 92 281

Links

Other T-box family TFs
Other Trichinella nativa TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EFV54310 Trichinella spiralis EFV54310 I 0.920
TMUE_s0080002600 Trichuris muris TMUE_s0080002600 I 0.853
TTRE_0000323501 Trichuris trichiura TTRE_0000323501 I 0.853
GI17986 Drosophila mojavensis FBgn0140726 I 0.791
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.782
GF14392 Drosophila ananassae FBgn0091419 I 0.782
GG25073 Drosophila erecta FBgn0117202 I 0.782
GM18548 Drosophila sechellia FBgn0173455 I 0.782
GD23341 Drosophila simulans FBgn0194727 I 0.782
GJ19568 Drosophila virilis FBgn0206710 I 0.782
GK15086 Drosophila willistoni FBgn0217091 I 0.782
GE25417 Drosophila yakuba FBgn0242487 I 0.782
mid Drosophila melanogaster FBgn0261963 D 0.782
LCUP000433 Lucilia cuprina LCUP000433 I 0.782
MDOA010319 Musca domestica MDOA010319 I 0.782
TBX20 Canis familiaris ENSCAFG00000028536 I 0.764
tbx20 Danio rerio ENSDARG00000005150 I 0.764
tbx20 Gasterosteus aculeatus ENSGACG00000012706 I 0.764
ENSGMOG00000012734 Gadus morhua ENSGMOG00000012734 I 0.764
ENSLOCG00000002483 Lepisosteus oculatus ENSLOCG00000002483 I 0.764
ENSONIG00000006593 Oreochromis niloticus ENSONIG00000006593 I 0.764
ENSPFOG00000012859 Poecilia formosa ENSPFOG00000012859 I 0.764
tbx20 Tetraodon nigroviridis ENSTNIG00000005154 I 0.764
tbx20 Takifugu rubripes ENSTRUG00000005667 I 0.764
ENSXMAG00000004704 Xiphophorus maculatus ENSXMAG00000004704 I 0.764
tbx20 Xenopus tropicalis XB-GENE-487334 I 0.764
tbx20.L Xenopus laevis XB-GENE-865696 I 0.764
SMAR008438 Strigamia maritima SMAR008438 I 0.762
AAEL008337 Aedes aegypti AAEL008337 I 0.761
TBX20 Anolis carolinensis ENSACAG00000007473 I 0.761
TBX20 Bos taurus ENSBTAG00000017541 I 0.761
TBX20 Callithrix jacchus ENSCJAG00000012232 I 0.761
TBX20 Cavia porcellus ENSCPOG00000015229 I 0.761
ENSCSAG00000014936 Chlorocebus sabaeus ENSCSAG00000014936 I 0.761
TBX20 Dasypus novemcinctus ENSDNOG00000004142 I 0.761
TBX20 Equus caballus ENSECAG00000018182 I 0.761
TBX20 Erinaceus europaeus ENSEEUG00000010135 I 0.761
TBX20 Echinops telfairi ENSETEG00000012771 I 0.761
ENSFALG00000002727 Ficedula albicollis ENSFALG00000002727 I 0.761
TBX20 Felis catus ENSFCAG00000013004 I 0.761
TBX20 Homo sapiens ENSG00000164532 D 0.761
ENSGALG00000012151 Gallus gallus ENSGALG00000012151 I 0.761
TBX20 Gorilla gorilla ENSGGOG00000026618 I 0.761
ENSLACG00000010741 Latimeria chalumnae ENSLACG00000010741 I 0.761
TBX20 Loxodonta africana ENSLAFG00000012790 I 0.761
TBX20 Meleagris gallopavo ENSMGAG00000012040 I 0.761
TBX20 Myotis lucifugus ENSMLUG00000015517 I 0.761
TBX20 Macaca mulatta ENSMMUG00000012549 I 0.761
TBX20 Monodelphis domestica ENSMODG00000000085 I 0.761
ENSMPUG00000007865 Mustela putorius furo ENSMPUG00000007865 I 0.761
Tbx20 Mus musculus ENSMUSG00000031965 D 0.761
ENSNLEG00000001606 Nomascus leucogenys ENSNLEG00000001606 I 0.761
ENSOANG00000006968 Ornithorhynchus anatinus ENSOANG00000006968 I 0.761
TBX20 Oryctolagus cuniculus ENSOCUG00000007422 I 0.761
TBX20 Otolemur garnettii ENSOGAG00000010338 I 0.761
TBX20 Ochotona princeps ENSOPRG00000013626 I 0.761
ENSPANG00000007074 Papio anubis ENSPANG00000007074 I 0.761
ENSPPYG00000017641 Pongo abelii ENSPPYG00000017641 I 0.761
ENSPSIG00000016149 Pelodiscus sinensis ENSPSIG00000016149 I 0.761
TBX20 Pan troglodytes ENSPTRG00000019076 I 0.761
Tbx20 Rattus norvegicus ENSRNOG00000016181 I 0.761
ENSSHAG00000016356 Sarcophilus harrisii ENSSHAG00000016356 I 0.761
TBX20 Sus scrofa ENSSSCG00000016662 I 0.761
TBX20 Taeniopygia guttata ENSTGUG00000005375 I 0.761
TBX20 Tursiops truncatus ENSTTRG00000016622 I 0.761
ENSP00000386170 Macaca fascicularis ENSP00000386170 I 0.761
Myotis_brandtii_Tbx20_10020109 Myotis brandtii Myotis_brandtii_Tbx20_10020109 I 0.761
Pvit_04171 Pogona vitticeps Pvit_04171 I 0.761
ENSOARG00000005153 Ovis aries ENSOARG00000005153 I 0.760
ENSP00000386170-D1 Bos grunniens ENSP00000386170-D1 I 0.760
tbx20 Ciona intestinalis ENSCING00000005267 I 0.759
SMAR015389 Strigamia maritima SMAR015389 I 0.758
tetur32g01390 Tetranychus urticae tetur32g01390 I 0.758
tetur32g01430 Tetranychus urticae tetur32g01430 I 0.758
MDOA009961 Musca domestica MDOA009961 I 0.757
ENSAMXG00000002328 Astyanax mexicanus ENSAMXG00000002328 I 0.756
Ogr18070 Ophisaurus gracilis Ogr18070 I 0.755
GF14390 Drosophila ananassae FBgn0091417 I 0.753
GI17985 Drosophila mojavensis FBgn0140725 I 0.753
GJ19565 Drosophila virilis FBgn0206707 I 0.753
Cmyd_10006683 Chelonia mydas Cmyd_10006683 I 0.753
TASK_0000456901 Taenia asiatica TASK_0000456901 I 0.753
GK15084 Drosophila willistoni FBgn0217089 I 0.751
TC014296 Tribolium castaneum TC014296 I 0.751
AGAP008569 Anopheles gambiae AGAP008569 I 0.750
GL25841 Drosophila persimilis FBgn0163425 I 0.750
GA25466 Drosophila pseudoobscura FBgn0246844 I 0.750
HMEL012426 Heliconius melpomene HMEL012426 I 0.750
ADAC004417 Anopheles darlingi ADAC004417 I 0.749
AGAP008567 Anopheles gambiae AGAP008567 I 0.749
AALB000416 Anopheles albimanus AALB000416 I 0.749
AARA011014 Anopheles arabiensis AARA011014 I 0.749
AATE013317 Anopheles atroparvus AATE013317 I 0.749
ACOM023916 Anopheles coluzzii ACOM023916 I 0.749
ACUA008697 Anopheles culicifacies ACUA008697 I 0.749
ADIR010890 Anopheles dirus ADIR010890 I 0.749
AEPI001842 Anopheles epiroticus AEPI001842 I 0.749
AFAF008895 Anopheles farauti AFAF008895 I 0.749
AFUN010568 Anopheles funestus AFUN010568 I 0.749
AMAM010638 Anopheles maculatus AMAM010638 I 0.749
AMEC012505 Anopheles melas AMEC012505 I 0.749
AMEC014683 Anopheles melas AMEC014683 I 0.749
AMEM005379 Anopheles merus AMEM005379 I 0.749
AMIN000992 Anopheles minimus AMIN000992 I 0.749
AQUA000256 Anopheles quadriannulatus AQUA000256 I 0.749
ASTEI05184 Anopheles stephensi ASTEI05184 I 0.749
H15 Drosophila melanogaster FBgn0016660 I 0.746
GG25071 Drosophila erecta FBgn0117200 I 0.746
GM18547 Drosophila sechellia FBgn0173454 I 0.746
GD23340 Drosophila simulans FBgn0194726 I 0.746
GE25406 Drosophila yakuba FBgn0242479 I 0.746
e_gw.90.81.1 Branchiostoma floridae e_gw.90.81.1 I 0.745
Sakowv30029504m.g Saccoglossus kowalevskii Sakowv30029504m.g I 0.745
D915_09218 Fasciola hepatica D915_09218 I 0.742
GB45715 Apis mellifera GB45715 I 0.741
L798_07505 Zootermopsis nevadensis L798_07505 I 0.741
HelroG134299 Helobdella robusta HelroG134299 I 0.737
AGAP008563 Anopheles gambiae AGAP008563 I 0.736
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.736
HelroG98030 Helobdella robusta HelroG98030 I 0.736
ASTEI05186 Anopheles stephensi ASTEI05186 I 0.736
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I 0.735
ACYPI008613 Acyrthosiphon pisum ACYPI008613 I 0.734