CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001881001
(
Gongylonema pulchrum
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
GPUH_0001881001
T341722_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001881001-mRNA-1
T-box
1
69
MFPTMKLSIGGCDSDAFYYVFLDVIPVDNRRYRYIYNKSSWLTAGKAEPAPRNRLYMHPDSPFTGEQLI
GPUH_0001881001-mRNA-1
T-box
66
141
EQLILNSMHKYQPRVHVVRRPRERPIEQVMTIDLRSEHYKTFQFKETQFMAVTAYQNQLITKLKIEKNPFAKGFRD
Links
Other
T-box
family TFs
Other
Gongylonema pulchrum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ogr13982
Ophisaurus gracilis
Ogr13982
N
0.806
D917_01782
Trichinella nativa
D917_01782
N
0.778
ACEP18442
Atta cephalotes
ACEP18442
N
0.769
ASIS020533
Anopheles sinensis
ASIS020533
N
0.764
MhA1_Contig194.frz3.gene43
Meloidogyne hapla
MhA1_Contig194.frz3.gene43
N
0.741
SMAR009457
Strigamia maritima
SMAR009457
N
0.740