CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g03055
(
Litomosoides sigmodontis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
nLs.2.1.2.g03055
T341846_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t03055-RA
T-box
8
199
VAISHRKLWEEFHRNNNEMILTSKGRCIYPRIGYSVEGLEPKAMYLVCLKICRADQARYKYTAGEWHMTATGDRESEERYIYPDNGSTQLGQYWMNNGIRFGKLKITNSAKDCCSNVLLTSMYKYHPVLYIYKVYATPALCLDGSTILTNQYQLVKSFTDEIMEFIAVTAYQNQRIIEMKKIHNSYARGQRG
Links
Other
T-box
family TFs
Other
Litomosoides sigmodontis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g04249
Acanthocheilonema viteae
nAv.1.0.1.g04249
N
0.893
nDi.2.2.2.g04304
Dirofilaria immitis
nDi.2.2.2.g04304
N
0.887
Bm5637
Brugia malayi
Bm5637
N
0.875
BTMF_0001254101
Brugia timori
BTMF_0001254101
N
0.875
WBGene00246057
Onchocerca volvulus
WBGene00246057
N
0.873
nOo.2.0.1.g07364
Onchocerca ochengi
nOo.2.0.1.g07364
N
0.873
WUBG_01797
Wuchereria bancrofti
WUBG_01797
N
0.860
EEL_0000891501
Elaeophora elaphi
EEL_0000891501
N
0.841
TCLT_0000946001
Thelazia callipaeda
TCLT_0000946001
N
0.759