CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.9728
(
Phytophthora kernoviae
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
fgenesh_scip_prom.46568.9728
T342552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.9728
TBP
53
135
QVKIMNVVGTVDLKTPLDLKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGGTSEDSCRLAARKFTRVIQKL
fgenesh_scip_prom.46568.9728
TBP
143
172
EFKVRNVMGTCDIRFPIRLEGLLNDHALRA
Links
Other
TBP
family TFs
Other
Phytophthora kernoviae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_17719
Phytophthora parasitica
F443_17719
N
0.973
fgenesh_scip_prom.28083.3030
Phytophthora lateralis
fgenesh_scip_prom.28083.3030
N
0.973
PITG_07312
Phytophthora infestans
PITG_07312
N
0.973
maker-pir_contig_920-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_920-fgenesh-gene-0.2
N
0.964
maker-piw_contig_412-fgenesh-gene-0.6
Pythium iwayamai
maker-piw_contig_412-fgenesh-gene-0.6
N
0.964
estExt_Genewise1Plus.C_30071
Phytophthora capsici
estExt_Genewise1Plus.C_30071
N
0.964
Phyra44780
Phytophthora ramorum
Phyra44780
N
0.938
Physo111770
Phytophthora sojae
Physo111770
N
0.938
PYU1_G013989
Pythium ultimum
PYU1_G013989
N
0.920
ALNC14_032430
Albugo laibachii
ALNC14_032430
N
0.768
HpaG813722
Hyaloperonospora arabidopsidis
HpaG813722
N
0.732
SPRG_03180
Saprolegnia parasitica
SPRG_03180
N
0.714
HpaG813721
Hyaloperonospora arabidopsidis
HpaG813721
N
0.705