CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_59-fgenesh-gene-0.7
(
Pythium aphanidermatum
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
maker-pag1_scaffold_59-fgenesh-gene-0.7
T342687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000015435
TBP
737
818
LIASNFVSSANLGMRFDLNALVIKSQRKFELVPKKNCLLMKLAHPRATAMLFANGKLVCSGADSEEGIKAAARKCTQIIQKI
EPrPA00000015435
TBP
828
911
DFKIQNVVGACDVGFRILIEELSFAHSDQCTYEPEVYPALIYRLDRPKVKILVFVSGKVVITGTKDPRELKSALNALYPILCQF
Links
Other
TBP
family TFs
Other
Pythium aphanidermatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_233-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_233-fgenesh-gene-0.3
N
0.753
maker-piw_contig_55-fgenesh-gene-0.12
Pythium iwayamai
maker-piw_contig_55-fgenesh-gene-0.12
N
0.753
PYU1_G010143
Pythium ultimum
PYU1_G010143
N
0.741
Phyra84970
Phytophthora ramorum
Phyra84970
N
0.711
F443_17630
Phytophthora parasitica
F443_17630
N
0.707
PITG_12304
Phytophthora infestans
PITG_12304
N
0.704
Physo129327
Phytophthora sojae
Physo129327
N
0.701