CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc03645
(
Meloidogyne incognita
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
Minc03645
T343288_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03645
TBP
78
158
DIKVHNILCNYTLPMHIDLRLLAYHSINVDYDRFKGVLVKQLRDPDCTVKIFNSGKVVIFRCKSEIECKRASRQIARMIQR
Minc03645
TBP
171
255
KYRVSNIFATCRLPFSIHIDEVARKYRGEGAKYEPELAPGLEWTLRDPKSYLRVHTTGSITISGATSELDLITSIQRVYPFLKEF
Links
Other
TBP
family TFs
Other
Meloidogyne incognita
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf08999-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf08999-augustus-gene-0.6
N
0.994
Minc04640
Meloidogyne incognita
Minc04640
N
0.976
Minc15716
Meloidogyne incognita
Minc15716
N
0.976
maker-nMf.1.1.scaf00549-augustus-gene-0.17
Meloidogyne floridensis
maker-nMf.1.1.scaf00549-augustus-gene-0.17
N
0.816