CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI08G12580
(
Oryza meridionalis
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
OMERI08G12580
T344128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI08G12580.1
TCP
26
173
RRSARLQPIKAIEWLIRTVAAAIDALPSLDCSFVLPNAASSPPADDAEVSTSETSKSSVLSLTNAPCDNGDAFAEFLHCSNTNGSKPLQQQATLAYYAAAQSAHMAAPISFEMMAMPPHLAFSQEQQQHATVAAFNRGTLRTKPAARS
Links
Other
TCP
family TFs
Other
Oryza meridionalis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART11G08950
Oryza barthii
OBART11G08950
N
0.920
LjSGA_135269.1
Lotus japonicus
LjSGA_135269.1
N
0.910
MDP0000420968
Malus domestica
MDP0000420968
N
0.884
OB12G25740
Oryza brachyantha
OB12G25740
N
0.878
TRIUR3_03984
Triticum urartu
TRIUR3_03984
N
0.873
TRIUR3_02266
Triticum urartu
TRIUR3_02266
N
0.863
Traes_7AS_FCC142DBE
Triticum aestivum
Traes_7AS_FCC142DBE
N
0.855
TRIUR3_26293
Triticum urartu
TRIUR3_26293
N
0.855
Si014095m.g
Setaria italica
Si014095m.g
N
0.842
Pavir.J38641
Panicum virgatum
Pavir.J38641
N
0.830
Bra032973
Brassica rapa
Bra032973
N
0.825
BGLB000529
Biomphalaria glabrata
BGLB000529
N
0.822