CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.127020
(
Cucumis sativus
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Cucsa.127020
T344639_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.127020.1
TCP
22
124
VGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLLNAKSAIDALSRPLQTEDNDCRKQSFSLPVPSSSSSSSSSSSSSQFQSYPLQNFSQKV
Links
Other
TCP
family TFs
Other
Cucumis sativus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000182310
Malus domestica
MDP0000182310
I
0.839
MDP0000259723
Malus domestica
MDP0000259723
I
0.839
Solyc05g012840.1
Solanum lycopersicum
Solyc05g012840.1
I
0.837
Cla013734
Citrullus lanatus
Cla013734
I
0.831
Pm010118
Prunus mume
Pm010118
I
0.830
cassava35945.valid.m1
Manihot esculenta
cassava35945.valid.m1
I
0.827
GSMUA_Achr6G14430_001
Musa acuminata
GSMUA_Achr6G14430_001
I
0.826
Solyc05g032780.1
Solanum lycopersicum
Solyc05g032780.1
I
0.826
chr3.CM0160.1110.nc
Lotus japonicus
chr3.CM0160.1110.nc
I
0.825
GLYMA12G14200
Glycine max
GLYMA12G14200
I
0.824
SELMODRAFT_7330
Selaginella moellendorffii
SELMODRAFT_7330
I
0.824
Ciclev10015871m.g
Citrus clementina
Ciclev10015871m.g
I
0.822
orange1.1g019898m.g
Citrus sinensis
orange1.1g019898m.g
I
0.822