CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene26211-v1.0-hybrid
(
Fragaria vesca
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
gene26211-v1.0-hybrid
T344843_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna26211.1-v1.0-hybrid
TCP
44
165
INPNCNFASVVSGSKQDQDLLENTHHHMHPPLSFVYFPSPLEDDDVLLHHHHHHELLSLHENTLSASHHHHHQTGTPLTAMVEWDSNKDDQLLIMSKEGEQQQQQQQQQQQQQQQQQILIPT
mrna26211.1-v1.0-hybrid
TCP
169
316
SCKKDRHSKIRTARGLRDRRMRLSLDVARNFFGLQDMLGFDKASKTVAWLLNKAGPEIGKVREMSGQNENQSSVSDCEVVSGTDEAATDEIIDKISRKPSSSSCANNRIKRTVRQPKKSAFFNPLAKASRVKARARAKERTREKMERR
Links
Other
TCP
family TFs
Other
Fragaria vesca
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_06609
Cicer arietinum
Ca_06609
N
0.912
SapurV1A.0079s0550
Salix purpurea
SapurV1A.0079s0550
N
0.885
cassava46222.m1
Manihot esculenta
cassava46222.m1
N
0.874
Pavir.Ea03897
Panicum virgatum
Pavir.Ea03897
N
0.825