CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf06328-processed-gene-0.3
(
Meloidogyne floridensis
)
THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05485 (THAP)
IPR006612
snap_masked-nMf.1.1.scaf06328-processed-gene-0.3
T350136_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf06328-processed-gene-0.3-mRNA-1
THAP finger
4
101
TCGYPNCKFRSRYRGQEDNRHFYRIPKRPAVLRQAWLNAIGRNEETVLRICSAHFFGGEKHEGDIPVADPQIDTPKFIELPPKESRTAERKSRLKGRK
Links
Other
THAP finger
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_001021700
Globodera pallida
GPLIN_001021700
N
0.731