CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.237770
(
Cucumis sativus
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Cucsa.237770
T350602_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.237770.1
Whirly
65
200
VYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQLFALSATEIGSLISLGPRDSCEFFHDPGMLSSTAGQVRKSLAIKAHTDGNGYFFSLNVVNKPQNTNDYLSVPFTTGEFSVMKTA
Links
Other
Whirly
family TFs
Other
Cucumis sativus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_19666
Hordeum vulgare
MLOC_19666
N
0.783
Cla012584
Citrullus lanatus
Cla012584
N
0.742
ATWHY2
Populus trichocarpa
POPTR_0003s04700
N
0.714
mgf015710m
Mimulus guttatus
mgf015710m
N
0.706