CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.045770
(
Cucumis sativus
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Cucsa.045770
T351464_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.045770.1
WRC
9
51
PDHLRCKRTDGKQWRCKRRVMDNLKLCEIHYLQGRHRQCKEKV
Links
Other
WRC
family TFs
Other
Cucumis sativus
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla001358
Citrullus lanatus
Cla001358
N
1.000
Ca_22019
Cicer arietinum
Ca_22019
N
0.930
MTR_4g091520
Medicago truncatula
MTR_4g091520
N
0.884
GLYMA07G30840
Glycine max
GLYMA07G30840
N
0.860
GLYMA08G06460
Glycine max
GLYMA08G06460
N
0.860
PRUPE_ppa000920mg
Prunus persica
PRUPE_ppa000920mg
N
0.860
VIT_00s0203g00120
Vitis vinifera
VIT_00s0203g00120
N
0.860
Pm009889
Prunus mume
Pm009889
N
0.860
MDP0000255157
Malus domestica
MDP0000255157
N
0.837
LjSGA_025508.1
Lotus japonicus
LjSGA_025508.1
N
0.837
29933.m001442
Ricinus communis
29933.m001442
N
0.814
cassava37903.valid.m1
Manihot esculenta
cassava37903.valid.m1
N
0.814
Ciclev10018309m.g
Citrus clementina
Ciclev10018309m.g
N
0.814
gene30727-v1.0-hybrid
Fragaria vesca
gene30727-v1.0-hybrid
N
0.814
orange1.1g038377m.g
Citrus sinensis
orange1.1g038377m.g
N
0.814
POPTR_0004s03270
Populus trichocarpa
POPTR_0004s03270
N
0.791
POPTR_0011s04100
Populus trichocarpa
POPTR_0011s04100
N
0.791
Ca_00230
Cicer arietinum
Ca_00230
N
0.791
cassava19501.valid.m1
Manihot esculenta
cassava19501.valid.m1
N
0.791
Eucgr.D00753
Eucalyptus grandis
Eucgr.D00753
N
0.791
SapurV1A.1088s0070
Salix purpurea
SapurV1A.1088s0070
N
0.791
Solyc02g079300.2
Solanum lycopersicum
Solyc02g079300.2
N
0.767
evm.TU.supercontig_27.138
Carica papaya
evm.TU.supercontig_27.138
N
0.767
Gorai.011G024000
Gossypium raimondii
Gorai.011G024000
N
0.767
PK26526.1
Cannabis sativa
PK26526.1
N
0.767
TCM_030013
Theobroma cacao
TCM_030013
N
0.744
MTR_2g011630
Medicago truncatula
MTR_2g011630
N
0.721
Lus10020084.g
Linum usitatissimum
Lus10020084.g
N
0.721