CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ia01825
(
Panicum virgatum
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Pavir.Ia01825
T351732_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia01825.1.p
WRC
177
219
ARVWKCKKNDGKRWHCHRTVSQPNTLCKYHFVQKRSYLNPDYE
Pavir.Ia01825.2.p
WRC
177
219
ARVWKCKKNDGKRWHCHRTVSQPNTLCKYHFVQKRSYLNPDYE
Links
Other
WRC
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib03137
Panicum virgatum
Pavir.Ib03137
N
0.977
Si036112m.g
Setaria italica
Si036112m.g
N
0.907
GRMZM2G001592
Zea mays
GRMZM2G001592
N
0.837
Sb01g020490
Sorghum bicolor
Sb01g020490
N
0.837
Sb01g020500
Sorghum bicolor
Sb01g020500
N
0.791
GRMZM2G001606
Zea mays
GRMZM2G001606
N
0.767
OB10G19000
Oryza brachyantha
OB10G19000
N
0.744
OBART10G11690
Oryza barthii
OBART10G11690
N
0.721
ORGLA10G0103000
Oryza glaberrima
ORGLA10G0103000
N
0.721