CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB05G20200
(
Oryza brachyantha
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
OB05G20200
T353381_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.813
0.600
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN
NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.809
0.545
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB05G20200.1
WRKY
170
229
DDGYTWRKYGQKDILGSRYPRSYYRCTHKNYYGCEAKKKVQRLDDDPFTYEEKTTVLLAS
Links
Other
WRKY
family TFs
Other
Oryza brachyantha
TFs
220 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA019620
Oryza indica
BGIOSGA019620
I
0.845
BRADI2G30800
Brachypodium distachyon
BRADI2G30800
I
0.845
F775_02122
Aegilops tauschii
F775_02122
I
0.845
LPERR05G09170
Leersia perrieri
LPERR05G09170
I
0.845
OBART05G11690
Oryza barthii
OBART05G11690
I
0.845
OGLUM05G12420
Oryza glumaepatula
OGLUM05G12420
I
0.845
OLONG_021880
Oryza longistaminata
OLONG_021880
I
0.845
OMERI05G10350
Oryza meridionalis
OMERI05G10350
I
0.845
ONIVA05G12080
Oryza nivara
ONIVA05G12080
I
0.845
OPUNC05G10010
Oryza punctata
OPUNC05G10010
I
0.845
ORGLA05G0099300
Oryza glaberrima
ORGLA05G0099300
I
0.845
ORUFI05G12690
Oryza rufipogon
ORUFI05G12690
I
0.845
OS05G0321900
Oryza sativa
OS05G0321900
I
0.845
Si025307m.g
Setaria italica
Si025307m.g
I
0.845
TRIUR3_24602
Triticum urartu
TRIUR3_24602
I
0.845
Pavir.Ca01708
Panicum virgatum
Pavir.Ca01708
I
0.845
GRMZM2G127064
Zea mays
GRMZM2G127064
I
0.843
Traes_6AS_68775100B
Triticum aestivum
Traes_6AS_68775100B
I
0.840
GSMUA_Achr8G01730_001
Musa acuminata
GSMUA_Achr8G01730_001
I
0.836
AMTR_s00015p00228580
Amborella trichopoda
AMTR_s00015p00228580
I
0.825
AMTR_s00015p00229650
Amborella trichopoda
AMTR_s00015p00229650
I
0.825
GLYMA04G40121
Glycine max
GLYMA04G40121
I
0.825
SapurV1A.0035s0630
Salix purpurea
SapurV1A.0035s0630
I
0.825
VIT_16s0050g02510
Vitis vinifera
VIT_16s0050g02510
I
0.824
Bo6g066790
Brassica oleracea
Bo6g066790
I
0.823
29729.m002370
Ricinus communis
29729.m002370
I
0.823
gene19219-v1.0-hybrid
Fragaria vesca
gene19219-v1.0-hybrid
I
0.823
GLYMA04G41701
Glycine max
GLYMA04G41701
I
0.822
GLYMA06G13090
Glycine max
GLYMA06G13090
I
0.822
mgf020540m
Mimulus guttatus
mgf020540m
I
0.822
LjSGA_021425.1
Lotus japonicus
LjSGA_021425.1
I
0.822
GRMZM2G324999
Zea mays
GRMZM2G324999
I
0.821
mgf026576m
Mimulus guttatus
mgf026576m
I
0.821
Gorai.007G014600
Gossypium raimondii
Gorai.007G014600
I
0.821
SapurV1A.2126s0010
Salix purpurea
SapurV1A.2126s0010
I
0.821
Bo4g114050
Brassica oleracea
Bo4g114050
I
0.820
TCM_015346
Theobroma cacao
TCM_015346
I
0.820
WRKY55
Vitis vinifera
VIT_13s0067g03130
I
0.820
cassava8741.m1
Manihot esculenta
cassava8741.m1
I
0.820
Eucgr.G03145
Eucalyptus grandis
Eucgr.G03145
I
0.820
Eucgr.K00331
Eucalyptus grandis
Eucgr.K00331
I
0.820
evm.TU.supercontig_3.53
Carica papaya
evm.TU.supercontig_3.53
I
0.820
Gorai.008G270600
Gossypium raimondii
Gorai.008G270600
I
0.820
Gorai.012G014000
Gossypium raimondii
Gorai.012G014000
I
0.820
PK21971.1
Cannabis sativa
PK21971.1
I
0.820
AMTR_s00077p00103580
Amborella trichopoda
AMTR_s00077p00103580
I
0.819
cassava2047.valid.m1
Manihot esculenta
cassava2047.valid.m1
I
0.819
Ciclev10021038m.g
Citrus clementina
Ciclev10021038m.g
I
0.819
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.819
gene13108-v1.0-hybrid
Fragaria vesca
gene13108-v1.0-hybrid
I
0.819
MDP0000767097
Malus domestica
MDP0000767097
I
0.819
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.819
orange1.1g019737m.g
Citrus sinensis
orange1.1g019737m.g
I
0.819
PDK_20s1521921g002
Phoenix dactylifera
PDK_20s1521921g002
I
0.819
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
0.818
Al_scaffold_0005_2548
Arabidopsis lyrata
Al_scaffold_0005_2548
I
0.818
POPTR_0003s13840
Populus trichocarpa
POPTR_0003s13840
I
0.818
TCM_016426
Theobroma cacao
TCM_016426
I
0.818
TCM_045555
Theobroma cacao
TCM_045555
I
0.818
VIT_02s0025g01280
Vitis vinifera
VIT_02s0025g01280
I
0.818
30190.m010814
Ricinus communis
30190.m010814
I
0.818
cassava42820.valid.m1
Manihot esculenta
cassava42820.valid.m1
I
0.818
cassava43538.valid.m1
Manihot esculenta
cassava43538.valid.m1
I
0.818
evm.TU.supercontig_79.60
Carica papaya
evm.TU.supercontig_79.60
I
0.818
SapurV1A.0237s0250
Salix purpurea
SapurV1A.0237s0250
I
0.818
LjT41F16.60.nd
Lotus japonicus
LjT41F16.60.nd
I
0.818
GLYMA05G36970
Glycine max
GLYMA05G36970
I
0.817
GLYMA06G14731
Glycine max
GLYMA06G14731
I
0.817
PGSC0003DMG400008776
Solanum tuberosum
PGSC0003DMG400008776
I
0.817
PRUPE_ppa007986mg
Prunus persica
PRUPE_ppa007986mg
I
0.817
Sb07g019400
Sorghum bicolor
Sb07g019400
I
0.817
SELMODRAFT_29702
Selaginella moellendorffii
SELMODRAFT_29702
I
0.817
SELMODRAFT_29703
Selaginella moellendorffii
SELMODRAFT_29703
I
0.817
Pm019783
Prunus mume
Pm019783
I
0.817
Cagra.0925s0055
Capsella grandiflora
Cagra.0925s0055
I
0.817
Carubv10017859m.g
Capsella rubella
Carubv10017859m.g
I
0.817
Eucgr.E00850
Eucalyptus grandis
Eucgr.E00850
I
0.817
Gorai.004G134600
Gossypium raimondii
Gorai.004G134600
I
0.817
AMTR_s00077p00103880
Amborella trichopoda
AMTR_s00077p00103880
I
0.816
MTR_3g090860
Medicago truncatula
MTR_3g090860
I
0.816
OBART08G13340
Oryza barthii
OBART08G13340
I
0.816
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
0.816
Ca_05815
Cicer arietinum
Ca_05815
I
0.816
cassava26362.m1
Manihot esculenta
cassava26362.m1
I
0.816
BGIOSGA040489
Oryza indica
BGIOSGA040489
I
0.815
LPERR08G11030
Leersia perrieri
LPERR08G11030
I
0.815
MLOC_71897
Hordeum vulgare
MLOC_71897
I
0.815
OGLUM07G10380
Oryza glumaepatula
OGLUM07G10380
I
0.815
OMERI08G11390
Oryza meridionalis
OMERI08G11390
I
0.815
ONIVA08G13920
Oryza nivara
ONIVA08G13920
I
0.815
ORGLA08G0116200
Oryza glaberrima
ORGLA08G0116200
I
0.815
ORUFI08G15010
Oryza rufipogon
ORUFI08G15010
I
0.815
OS08G0386200
Oryza sativa
OS08G0386200
I
0.815
PGSC0003DMG400000211
Solanum tuberosum
PGSC0003DMG400000211
I
0.815
POPTR_0001s10490
Populus trichocarpa
POPTR_0001s10490
I
0.815
PRUPE_ppa007708mg
Prunus persica
PRUPE_ppa007708mg
I
0.815
Solyc01g095630.2
Solanum lycopersicum
Solyc01g095630.2
I
0.815
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
0.815
Pm018401
Prunus mume
Pm018401
I
0.815
chr4.CM0025.230.nd
Lotus japonicus
chr4.CM0025.230.nd
I
0.815
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
0.814
MLOC_74974
Hordeum vulgare
MLOC_74974
I
0.814
POPTR_0013s09460
Populus trichocarpa
POPTR_0013s09460
I
0.814
TCM_006116
Theobroma cacao
TCM_006116
I
0.814
Cla011097
Citrullus lanatus
Cla011097
I
0.814
Pm019076
Prunus mume
Pm019076
I
0.814
29729.m002330
Ricinus communis
29729.m002330
I
0.814
30174.m008651
Ricinus communis
30174.m008651
I
0.814
Cucsa.107310
Cucumis sativus
Cucsa.107310
I
0.814
Aquca_030_00182
Aquilegia coerulea
Aquca_030_00182
I
0.814
Bostr.25463s0219
Boechera stricta
Bostr.25463s0219
I
0.814
Cagra.3839s0004
Capsella grandiflora
Cagra.3839s0004
I
0.814
Carubv10001458m.g
Capsella rubella
Carubv10001458m.g
I
0.814
Eucgr.J00107
Eucalyptus grandis
Eucgr.J00107
I
0.814
evm.TU.supercontig_19.45
Carica papaya
evm.TU.supercontig_19.45
I
0.814
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
0.814
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
0.814
WRKY55
Arabidopsis thaliana
AT2G40740
D
0.813
F775_25840
Aegilops tauschii
F775_25840
I
0.813
WRKY55
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001817
I
0.813
LPERR05G22060
Leersia perrieri
LPERR05G22060
I
0.813
POPTR_0019s08730
Populus trichocarpa
POPTR_0019s08730
I
0.813
Si015433m.g
Setaria italica
Si015433m.g
I
0.813
TCM_005179
Theobroma cacao
TCM_005179
I
0.813
Bostr.9345s0061
Boechera stricta
Bostr.9345s0061
I
0.813
Cagra.1642s0038
Capsella grandiflora
Cagra.1642s0038
I
0.813
Carubv10023773m.g
Capsella rubella
Carubv10023773m.g
I
0.813
evm.TU.contig_32256
Carica papaya
evm.TU.contig_32256
I
0.813
gene32076-v1.0-hybrid
Fragaria vesca
gene32076-v1.0-hybrid
I
0.813
Bo2g109030
Brassica oleracea
Bo2g109030
I
0.812
Bo4g190380
Brassica oleracea
Bo4g190380
I
0.812
Bo7g109140
Brassica oleracea
Bo7g109140
I
0.812
Bra013732
Brassica rapa
Bra013732
I
0.812
Bra014693
Brassica rapa
Bra014693
I
0.812
Bra016975
Brassica rapa
Bra016975
I
0.812
Bra019265
Brassica rapa
Bra019265
I
0.812
Bra033158
Brassica rapa
Bra033158
I
0.812
GLYMA19G44380
Glycine max
GLYMA19G44380
I
0.812
GSMUA_Achr6G32460_001
Musa acuminata
GSMUA_Achr6G32460_001
I
0.812
SELMODRAFT_113487
Selaginella moellendorffii
SELMODRAFT_113487
I
0.812
SELMODRAFT_29692
Selaginella moellendorffii
SELMODRAFT_29692
I
0.812
Cagra.1226s0044
Capsella grandiflora
Cagra.1226s0044
I
0.812
Carubv10006884m.g
Capsella rubella
Carubv10006884m.g
I
0.812
Eucgr.D02359
Eucalyptus grandis
Eucgr.D02359
I
0.812
Thhalv10017926m.g
Eutrema salsugineum
Thhalv10017926m.g
I
0.812
WRKY41
Arabidopsis lyrata
fgenesh2_kg.6__3080__AT4G11070.1
I
0.811
GLYMA07G06320
Glycine max
GLYMA07G06320
I
0.811
GLYMA16G02960
Glycine max
GLYMA16G02960
I
0.811
MTR_7g117200
Medicago truncatula
MTR_7g117200
I
0.811
POPTR_0014s09190
Populus trichocarpa
POPTR_0014s09190
I
0.811
28690.m000025
Ricinus communis
28690.m000025
I
0.811
Lus10029022.g
Linum usitatissimum
Lus10029022.g
I
0.811
MDP0000828055
Malus domestica
MDP0000828055
I
0.811
Bo4g190390
Brassica oleracea
Bo4g190390
I
0.810
Bra016974
Brassica rapa
Bra016974
I
0.810
GLYMA03G41750
Glycine max
GLYMA03G41750
I
0.810
GSMUA_Achr6G05710_001
Musa acuminata
GSMUA_Achr6G05710_001
I
0.810
OPUNC09G05480
Oryza punctata
OPUNC09G05480
I
0.810
PRUPE_ppa014826mg
Prunus persica
PRUPE_ppa014826mg
I
0.810
Ca_21669
Cicer arietinum
Ca_21669
I
0.810
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
0.810
Cagra.1642s0039
Capsella grandiflora
Cagra.1642s0039
I
0.810
Carubv10024972m.g
Capsella rubella
Carubv10024972m.g
I
0.810
Ciclev10005165m.g
Citrus clementina
Ciclev10005165m.g
I
0.810
Gorai.008G253300
Gossypium raimondii
Gorai.008G253300
I
0.810
Lus10001902.g
Linum usitatissimum
Lus10001902.g
I
0.810
orange1.1g045032m.g
Citrus sinensis
orange1.1g045032m.g
I
0.810
WRKY53
Arabidopsis thaliana
AT4G23810
D
0.809
WRKY53
Arabidopsis lyrata
fgenesh2_kg.7__1920__AT4G23810.1
I
0.809
GLYMA08G02580
Glycine max
GLYMA08G02580
I
0.809
GSMUA_Achr1G27980_001
Musa acuminata
GSMUA_Achr1G27980_001
I
0.809
GSMUA_AchrUn_randomG24820_001
Musa acuminata
GSMUA_AchrUn_randomG24820_001
I
0.809
LPERR01G21480
Leersia perrieri
LPERR01G21480
I
0.809
LPERR03G14340
Leersia perrieri
LPERR03G14340
I
0.809
MTR_5g067680
Medicago truncatula
MTR_5g067680
I
0.809
MTR_8g027860
Medicago truncatula
MTR_8g027860
I
0.809
MTR_8g099350
Medicago truncatula
MTR_8g099350
I
0.809
Cla007423
Citrullus lanatus
Cla007423
I
0.809
cassava36814.valid.m1
Manihot esculenta
cassava36814.valid.m1
I
0.809
cassava36815.valid.m1
Manihot esculenta
cassava36815.valid.m1
I
0.809
Cucsa.143840
Cucumis sativus
Cucsa.143840
I
0.809
Bostr.7867s0183
Boechera stricta
Bostr.7867s0183
I
0.809
Eucgr.G00258
Eucalyptus grandis
Eucgr.G00258
I
0.809
Eucgr.J02653
Eucalyptus grandis
Eucgr.J02653
I
0.809
Gorai.001G155800
Gossypium raimondii
Gorai.001G155800
I
0.809
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
0.809
Lus10001062.g
Linum usitatissimum
Lus10001062.g
I
0.809
Lus10039331.g
Linum usitatissimum
Lus10039331.g
I
0.809
Thhalv10025724m.g
Eutrema salsugineum
Thhalv10025724m.g
I
0.809
BGIOSGA001093
Oryza indica
BGIOSGA001093
I
0.808
BGIOSGA022355
Oryza indica
BGIOSGA022355
I
0.808
F775_25856
Aegilops tauschii
F775_25856
I
0.808
OB0086G10030
Oryza brachyantha
OB0086G10030
I
0.808
OBART01G25160
Oryza barthii
OBART01G25160
I
0.808
OBART06G03820
Oryza barthii
OBART06G03820
I
0.808
OGLUM01G28930
Oryza glumaepatula
OGLUM01G28930
I
0.808
OGLUM06G03950
Oryza glumaepatula
OGLUM06G03950
I
0.808
OMERI01G22920
Oryza meridionalis
OMERI01G22920
I
0.808
OMERI06G04430
Oryza meridionalis
OMERI06G04430
I
0.808
ONIVA01G28420
Oryza nivara
ONIVA01G28420
I
0.808
ONIVA06G05180
Oryza nivara
ONIVA06G05180
I
0.808
OPUNC01G25080
Oryza punctata
OPUNC01G25080
I
0.808
ORGLA01G0204900
Oryza glaberrima
ORGLA01G0204900
I
0.808
ORGLA06G0035800
Oryza glaberrima
ORGLA06G0035800
I
0.808
ORUFI01G28020
Oryza rufipogon
ORUFI01G28020
I
0.808
ORUFI06G03890
Oryza rufipogon
ORUFI06G03890
I
0.808
OS01G0656400
Oryza sativa
OS01G0656400
I
0.808
OS06G0158100
Oryza sativa
OS06G0158100
I
0.808
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
0.808
Si030531m.g
Setaria italica
Si030531m.g
I
0.808
Traes_3AL_6E92D4E1F
Triticum aestivum
Traes_3AL_6E92D4E1F
I
0.808
Traes_7DS_01F74C6F3
Triticum aestivum
Traes_7DS_01F74C6F3
I
0.808
TRIUR3_29889
Triticum urartu
TRIUR3_29889
I
0.808
Pm024064
Prunus mume
Pm024064
I
0.808
Cucsa.259110
Cucumis sativus
Cucsa.259110
I
0.808
Eucgr.G03144
Eucalyptus grandis
Eucgr.G03144
I
0.808
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.808
MDP0000146360
Malus domestica
MDP0000146360
I
0.808
MDP0000299114
Malus domestica
MDP0000299114
I
0.808
MDP0000315045
Malus domestica
MDP0000315045
I
0.808