CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29687.m000562
(
Ricinus communis
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
29687.m000562
T355399_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29687.m000562
WRKY
218
239
LDGYNWRKYGQKQVKSPKEIVN
29687.m000562
WRKY
363
420
SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTDAVIITYKGVHDHD
Links
Other
WRKY
family TFs
Other
Ricinus communis
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G36510
Glycine max
GLYMA02G36510
I
0.833
GLYMA17G08170
Glycine max
GLYMA17G08170
I
0.833
SapurV1A.1152s0100
Salix purpurea
SapurV1A.1152s0100
I
0.833
WRKY32
Arabidopsis thaliana
AT4G30935
I
0.832
WRKY32
Vitis vinifera
VIT_11s0037g00150
I
0.832
Cla019018
Citrullus lanatus
Cla019018
I
0.832
Cucsa.093390
Cucumis sativus
Cucsa.093390
I
0.832
Bostr.7867s0950
Boechera stricta
Bostr.7867s0950
I
0.832
Eucgr.C02545
Eucalyptus grandis
Eucgr.C02545
I
0.832
MDP0000131218
Malus domestica
MDP0000131218
I
0.832
WRKY32
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7000852
I
0.831
PRUPE_ppa004042mg
Prunus persica
PRUPE_ppa004042mg
I
0.831
Pm027732
Prunus mume
Pm027732
I
0.831
Cagra.0380s0033
Capsella grandiflora
Cagra.0380s0033
I
0.831
Carubv10006890m.g
Capsella rubella
Carubv10006890m.g
I
0.831
gene10079-v1.0-hybrid
Fragaria vesca
gene10079-v1.0-hybrid
I
0.831
PK26499.1
Cannabis sativa
PK26499.1
I
0.830
TCM_037060
Theobroma cacao
TCM_037060
I
0.829
Gorai.010G113000
Gossypium raimondii
Gorai.010G113000
I
0.829
MDP0000293456
Malus domestica
MDP0000293456
I
0.829
Ciclev10008135m.g
Citrus clementina
Ciclev10008135m.g
I
0.828
orange1.1g036653m.g
Citrus sinensis
orange1.1g036653m.g
I
0.828
Ca_03331
Cicer arietinum
Ca_03331
I
0.827
mgf012709m
Mimulus guttatus
mgf012709m
I
0.827
Gorai.001G032200
Gossypium raimondii
Gorai.001G032200
I
0.827
Eucgr.C00348
Eucalyptus grandis
Eucgr.C00348
I
0.826
Eucgr.C02481
Eucalyptus grandis
Eucgr.C02481
I
0.826
chr4.CM0179.130.nc
Lotus japonicus
chr4.CM0179.130.nc
I
0.826
Thhalv10025126m.g
Eutrema salsugineum
Thhalv10025126m.g
I
0.825
Bo7g114840
Brassica oleracea
Bo7g114840
I
0.824
Bra024035
Brassica rapa
Bra024035
I
0.824
MTR_4g130900
Medicago truncatula
MTR_4g130900
I
0.824
Lus10022150.g
Linum usitatissimum
Lus10022150.g
I
0.824
Lus10036268.g
Linum usitatissimum
Lus10036268.g
I
0.824
chr6.CM0037.700.nc
Lotus japonicus
chr6.CM0037.700.nc
I
0.824
Bra010266
Brassica rapa
Bra010266
I
0.823
mgf020482m
Mimulus guttatus
mgf020482m
I
0.823
Bo3g175320
Brassica oleracea
Bo3g175320
I
0.821
GLYMA12G23950
Glycine max
GLYMA12G23950
I
0.821
Solyc07g005650.2
Solanum lycopersicum
Solyc07g005650.2
I
0.821
GLYMA06G27440
Glycine max
GLYMA06G27440
I
0.819
VIT_04s0008g06600
Vitis vinifera
VIT_04s0008g06600
I
0.812
GLYMA08G26230
Glycine max
GLYMA08G26230
I
0.809
GLYMA18G49830
Glycine max
GLYMA18G49830
I
0.809
MTR_7g011820
Medicago truncatula
MTR_7g011820
I
0.809
WRKY58
Vitis vinifera
VIT_14s0108g01280
I
0.809
Ca_22090
Cicer arietinum
Ca_22090
I
0.809
Aquca_002_00721
Aquilegia coerulea
Aquca_002_00721
I
0.809