29848.m004545 (Ricinus communis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 29848.m004545 T355417_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.823 0.816
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.822 0.868
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.822 0.868
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.822 0.868
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.822 0.868
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.822 0.868
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.817 0.842
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.817 0.842
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.817 0.842
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.817 0.842
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29848.m004545 WRKY 173 210

Links

Other WRKY family TFs
Other Ricinus communis TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0018s02470 Populus trichocarpa POPTR_0018s02470 I 0.830
PRUPE_ppa008566mg Prunus persica PRUPE_ppa008566mg I 0.830
Pm005698 Prunus mume Pm005698 I 0.830
MDP0000307516 Malus domestica MDP0000307516 I 0.830
MDP0000418900 Malus domestica MDP0000418900 I 0.830
MDP0000689162 Malus domestica MDP0000689162 I 0.830
GSMUA_Achr7G19340_001 Musa acuminata GSMUA_Achr7G19340_001 I 0.829
gene15014-v1.0-hybrid Fragaria vesca gene15014-v1.0-hybrid I 0.827
WRKY76 Oryza indica BGIOSGA029758 I 0.826
Bo1g010960 Brassica oleracea Bo1g010960 I 0.826
Bo3g173640 Brassica oleracea Bo3g173640 I 0.826
Bo7g115410 Brassica oleracea Bo7g115410 I 0.826
Bra010220 Brassica rapa Bra010220 I 0.826
Bra011299 Brassica rapa Bra011299 I 0.826
Bra019123 Brassica rapa Bra019123 I 0.826
Bra023983 Brassica rapa Bra023983 I 0.826
F775_19657 Aegilops tauschii F775_19657 I 0.826
GLYMA13G44730 Glycine max GLYMA13G44730 I 0.826
GLYMA15G00570 Glycine max GLYMA15G00570 I 0.826
GLYMA17G33891 Glycine max GLYMA17G33891 I 0.826
LPERR09G07230 Leersia perrieri LPERR09G07230 I 0.826
MLOC_4945 Hordeum vulgare MLOC_4945 I 0.826
MTR_2g105060 Medicago truncatula MTR_2g105060 I 0.826
OB09G16960 Oryza brachyantha OB09G16960 I 0.826
OBART09G10380 Oryza barthii OBART09G10380 I 0.826
OGLUM09G10770 Oryza glumaepatula OGLUM09G10770 I 0.826
OMERI09G08210 Oryza meridionalis OMERI09G08210 I 0.826
ONIVA09G10030 Oryza nivara ONIVA09G10030 I 0.826
OPUNC09G08970 Oryza punctata OPUNC09G08970 I 0.826
ORGLA09G0076400 Oryza glaberrima ORGLA09G0076400 I 0.826
ORUFI09G11140 Oryza rufipogon ORUFI09G11140 I 0.826
WRKY76 Oryza sativa OS09G0417600 I 0.826
POPTR_0001s03620 Populus trichocarpa POPTR_0001s03620 I 0.826
POPTR_0006s27950 Populus trichocarpa POPTR_0006s27950 I 0.826
Si030429m.g Setaria italica Si030429m.g I 0.826
TCM_027435 Theobroma cacao TCM_027435 I 0.826
TCM_036913 Theobroma cacao TCM_036913 I 0.826
Traes_5AL_7164FEAC3 Triticum aestivum Traes_5AL_7164FEAC3 I 0.826
Traes_5BL_8BEF7F9CD Triticum aestivum Traes_5BL_8BEF7F9CD I 0.826
Traes_5BL_90757F0CC Triticum aestivum Traes_5BL_90757F0CC I 0.826
Traes_5DL_32D78D06A Triticum aestivum Traes_5DL_32D78D06A I 0.826
TRIUR3_16802 Triticum urartu TRIUR3_16802 I 0.826
TRIUR3_16803 Triticum urartu TRIUR3_16803 I 0.826
WRKY40 Vitis vinifera VIT_09s0018g00240 I 0.826
Ca_01713 Cicer arietinum Ca_01713 I 0.826
Cla022703 Citrullus lanatus Cla022703 I 0.826
43951.m000016 Ricinus communis 43951.m000016 I 0.826
cassava20767.m1 Manihot esculenta cassava20767.m1 I 0.826
cassava36924.valid.m1 Manihot esculenta cassava36924.valid.m1 I 0.826
cassava8446.m1 Manihot esculenta cassava8446.m1 I 0.826
Bostr.7867s1032 Boechera stricta Bostr.7867s1032 I 0.826
Cagra.3807s0050 Capsella grandiflora Cagra.3807s0050 I 0.826
Carubv10005349m.g Capsella rubella Carubv10005349m.g I 0.826
Ciclev10008930m.g Citrus clementina Ciclev10008930m.g I 0.826
Ciclev10026105m.g Citrus clementina Ciclev10026105m.g I 0.826
Eucgr.C02660 Eucalyptus grandis Eucgr.C02660 I 0.826
Gorai.009G062300 Gossypium raimondii Gorai.009G062300 I 0.826
orange1.1g020831m.g Citrus sinensis orange1.1g020831m.g I 0.826
Pavir.Ba01849 Panicum virgatum Pavir.Ba01849 I 0.826
Pavir.Bb02115 Panicum virgatum Pavir.Bb02115 I 0.826
SapurV1A.0184s0040 Salix purpurea SapurV1A.0184s0040 I 0.826
SapurV1A.0280s0370 Salix purpurea SapurV1A.0280s0370 I 0.826
Thhalv10025785m.g Eutrema salsugineum Thhalv10025785m.g I 0.826
PK08451.1 Cannabis sativa PK08451.1 I 0.826
PDK_20s1541671g001 Phoenix dactylifera PDK_20s1541671g001 I 0.826
BRADI4G30360 Brachypodium distachyon BRADI4G30360 I 0.825
Cucsa.162810 Cucumis sativus Cucsa.162810 I 0.825
AMTR_s00065p00201230 Amborella trichopoda AMTR_s00065p00201230 I 0.824
GSMUA_Achr3G13440_001 Musa acuminata GSMUA_Achr3G13440_001 I 0.824
MTR_3g106060 Medicago truncatula MTR_3g106060 I 0.824
PGSC0003DMG400019824 Solanum tuberosum PGSC0003DMG400019824 I 0.824
Solyc03g116890.2 Solanum lycopersicum Solyc03g116890.2 I 0.824
Solyc08g067340.2 Solanum lycopersicum Solyc08g067340.2 I 0.824
VIT_04s0008g05760 Vitis vinifera VIT_04s0008g05760 I 0.824
Ca_02925 Cicer arietinum Ca_02925 I 0.824
cassava37361.valid.m1 Manihot esculenta cassava37361.valid.m1 I 0.824
mgf010377m Mimulus guttatus mgf010377m I 0.824
mgf019151m Mimulus guttatus mgf019151m I 0.824
evm.TU.supercontig_127.25 Carica papaya evm.TU.supercontig_127.25 I 0.824
Gorai.009G124000 Gossypium raimondii Gorai.009G124000 I 0.824
PK20163.1 Cannabis sativa PK20163.1 I 0.824
LjT45M09.20.nd Lotus japonicus LjT45M09.20.nd I 0.824
WRKY60 Arabidopsis thaliana AT2G25000 D 0.823
WRKY60 Arabidopsis lyrata fgenesh2_kg.4__412__AT2G25000.1 I 0.823
PGSC0003DMG402007388 Solanum tuberosum PGSC0003DMG402007388 I 0.823
mgf006734m Mimulus guttatus mgf006734m I 0.823
Bostr.0556s0495 Boechera stricta Bostr.0556s0495 I 0.823
Cagra.2381s0005 Capsella grandiflora Cagra.2381s0005 I 0.823
Carubv10023876m.g Capsella rubella Carubv10023876m.g I 0.823
evm.TU.supercontig_10.75 Carica papaya evm.TU.supercontig_10.75 I 0.823
WRKY18 Arabidopsis thaliana AT4G31800 D 0.822
fgenesh1_pm.C_scaffold_7000774 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000774 I 0.822
GLYMA04G06495 Glycine max GLYMA04G06495 I 0.822
GLYMA06G06530 Glycine max GLYMA06G06530 I 0.822
GRMZM2G057011 Zea mays GRMZM2G057011 I 0.822
GRMZM2G125653 Zea mays GRMZM2G125653 I 0.822
MTR_1g013760 Medicago truncatula MTR_1g013760 I 0.822
Sb02g024760 Sorghum bicolor Sb02g024760 I 0.822
Bostr.26326s0173 Boechera stricta Bostr.26326s0173 I 0.822
chr1.CM0433.120.nd Lotus japonicus chr1.CM0433.120.nd I 0.822
chr5.CM0040.670.nd Lotus japonicus chr5.CM0040.670.nd I 0.822
GSMUA_Achr4G01930_001 Musa acuminata GSMUA_Achr4G01930_001 I 0.821
PGSC0003DMG400007387 Solanum tuberosum PGSC0003DMG400007387 I 0.821
Solyc08g067360.2 Solanum lycopersicum Solyc08g067360.2 I 0.821
GLYMA07G02630 Glycine max GLYMA07G02630 I 0.820
GSMUA_Achr1G10080_001 Musa acuminata GSMUA_Achr1G10080_001 I 0.820
GSMUA_Achr2G05100_001 Musa acuminata GSMUA_Achr2G05100_001 I 0.820
GSMUA_Achr7G05200_001 Musa acuminata GSMUA_Achr7G05200_001 I 0.820
PRUPE_ppa010796mg Prunus persica PRUPE_ppa010796mg I 0.820
Sb10g025590 Sorghum bicolor Sb10g025590 I 0.820
Sb10g025600 Sorghum bicolor Sb10g025600 I 0.820
Ca_22917 Cicer arietinum Ca_22917 I 0.820
Pm013791 Prunus mume Pm013791 I 0.820
Cucsa.177230 Cucumis sativus Cucsa.177230 I 0.820
Aquca_016_00214 Aquilegia coerulea Aquca_016_00214 I 0.820
Eucgr.F03955 Eucalyptus grandis Eucgr.F03955 I 0.820
Gorai.001G037700 Gossypium raimondii Gorai.001G037700 I 0.820
Gorai.010G118300 Gossypium raimondii Gorai.010G118300 I 0.820
Gorai.010G222400 Gossypium raimondii Gorai.010G222400 I 0.820
Lus10002309.g Linum usitatissimum Lus10002309.g I 0.820
Lus10024074.g Linum usitatissimum Lus10024074.g I 0.820
Lus10026082.g Linum usitatissimum Lus10026082.g I 0.820
Lus10041660.g Linum usitatissimum Lus10041660.g I 0.820
MDP0000177906 Malus domestica MDP0000177906 I 0.820
MDP0000228838 Malus domestica MDP0000228838 I 0.820
MDP0000263349 Malus domestica MDP0000263349 I 0.820
MDP0000263961 Malus domestica MDP0000263961 I 0.820
MDP0000794439 Malus domestica MDP0000794439 I 0.820
SapurV1A.0153s0580 Salix purpurea SapurV1A.0153s0580 I 0.820
LjSGA_046833.1 Lotus japonicus LjSGA_046833.1 I 0.820
OLONG_001234 Oryza longistaminata OLONG_001234 I 0.819
Eucgr.C02659 Eucalyptus grandis Eucgr.C02659 I 0.819
Eucgr.F04317 Eucalyptus grandis Eucgr.F04317 I 0.819
gene15013-v1.0-hybrid Fragaria vesca gene15013-v1.0-hybrid I 0.819
Thhalv10000288m.g Eutrema salsugineum Thhalv10000288m.g I 0.819
WRKY62 Oryza indica BGIOSGA029757 I 0.818
GLYMA08G23380 Glycine max GLYMA08G23380 I 0.818
GSMUA_Achr11G08290_001 Musa acuminata GSMUA_Achr11G08290_001 I 0.818
GSMUA_Achr5G16460_001 Musa acuminata GSMUA_Achr5G16460_001 I 0.818
GSMUA_Achr7G16090_001 Musa acuminata GSMUA_Achr7G16090_001 I 0.818
LPERR09G07240 Leersia perrieri LPERR09G07240 I 0.818
MTR_4g007060 Medicago truncatula MTR_4g007060 I 0.818
OB09G16970 Oryza brachyantha OB09G16970 I 0.818
OBART09G10390 Oryza barthii OBART09G10390 I 0.818
OGLUM09G10780 Oryza glumaepatula OGLUM09G10780 I 0.818
OMERI09G08220 Oryza meridionalis OMERI09G08220 I 0.818
ONIVA09G10050 Oryza nivara ONIVA09G10050 I 0.818
OPUNC09G08980 Oryza punctata OPUNC09G08980 I 0.818
ORGLA09G0076500 Oryza glaberrima ORGLA09G0076500 I 0.818
ORUFI09G11150 Oryza rufipogon ORUFI09G11150 I 0.818
WRKY62 Oryza sativa OS09G0417800 I 0.818
PGSC0003DMG400028520 Solanum tuberosum PGSC0003DMG400028520 I 0.818
Solyc06g068460.2 Solanum lycopersicum Solyc06g068460.2 I 0.818
mgf024657m Mimulus guttatus mgf024657m I 0.818
WRKY40 Arabidopsis thaliana AT1G80840 D 0.817
Bo2g095640 Brassica oleracea Bo2g095640 I 0.817
Bo6g124190 Brassica oleracea Bo6g124190 I 0.817
Bra003588 Brassica rapa Bra003588 I 0.817
Bra008435 Brassica rapa Bra008435 I 0.817
Bra035148 Brassica rapa Bra035148 I 0.817
WRKY40 Arabidopsis lyrata fgenesh2_kg.2__2291__AT1G80840.1 I 0.817
GLYMA14G11960 Glycine max GLYMA14G11960 I 0.817
TRIUR3_16804 Triticum urartu TRIUR3_16804 I 0.817
Cagra.1725s0057 Capsella grandiflora Cagra.1725s0057 I 0.817
Carubv10020726m.g Capsella rubella Carubv10020726m.g I 0.817
SapurV1A.0372s0180 Salix purpurea SapurV1A.0372s0180 I 0.817
Thhalv10018925m.g Eutrema salsugineum Thhalv10018925m.g I 0.817
PDK_20s1368561g002 Phoenix dactylifera PDK_20s1368561g002 I 0.817
PDK_20s1899311g001 Phoenix dactylifera PDK_20s1899311g001 I 0.817
AMTR_s00065p00201830 Amborella trichopoda AMTR_s00065p00201830 I 0.816
GSMUA_Achr10G06050_001 Musa acuminata GSMUA_Achr10G06050_001 I 0.816
Cla017484 Citrullus lanatus Cla017484 I 0.816
Cla021335 Citrullus lanatus Cla021335 I 0.816
Cucsa.271570 Cucumis sativus Cucsa.271570 I 0.816
Bostr.20129s0425 Boechera stricta Bostr.20129s0425 I 0.816
F775_13004 Aegilops tauschii F775_13004 I 0.815
F775_15894 Aegilops tauschii F775_15894 I 0.815
F775_19044 Aegilops tauschii F775_19044 I 0.815
GRMZM2G111711 Zea mays GRMZM2G111711 I 0.815
MLOC_70190 Hordeum vulgare MLOC_70190 I 0.815
Si030794m.g Setaria italica Si030794m.g I 0.815
Traes_7AL_AC56CC184 Triticum aestivum Traes_7AL_AC56CC184 I 0.815
Traes_7DL_5968FA56C Triticum aestivum Traes_7DL_5968FA56C I 0.815
Traes_7DL_B09854286 Triticum aestivum Traes_7DL_B09854286 I 0.815
Traes_7DL_B86B36F67 Triticum aestivum Traes_7DL_B86B36F67 I 0.815
Traes_7DL_F849918EA Triticum aestivum Traes_7DL_F849918EA I 0.815
TRIUR3_17960 Triticum urartu TRIUR3_17960 I 0.815
TRIUR3_24321 Triticum urartu TRIUR3_24321 I 0.815
TRIUR3_25260 Triticum urartu TRIUR3_25260 I 0.815
cassava18395.valid.m1 Manihot esculenta cassava18395.valid.m1 I 0.815
gene15841-v1.0-hybrid Fragaria vesca gene15841-v1.0-hybrid I 0.815
Pavir.Ba01850 Panicum virgatum Pavir.Ba01850 I 0.815
Pavir.Bb02124 Panicum virgatum Pavir.Bb02124 I 0.815
WRKY71 Oryza indica BGIOSGA007670 I 0.814
BGIOSGA020778 Oryza indica BGIOSGA020778 I 0.814
BRADI1G30870 Brachypodium distachyon BRADI1G30870 I 0.814
BRADI3G06070 Brachypodium distachyon BRADI3G06070 I 0.814
GRMZM2G120320 Zea mays GRMZM2G120320 I 0.814
LPERR02G05420 Leersia perrieri LPERR02G05420 I 0.814
LPERR06G18970 Leersia perrieri LPERR06G18970 I 0.814
MLOC_60890 Hordeum vulgare MLOC_60890 I 0.814
OB02G15470 Oryza brachyantha OB02G15470 I 0.814
OB06G30540 Oryza brachyantha OB06G30540 I 0.814
OBART02G06150 Oryza barthii OBART02G06150 I 0.814
OGLUM02G06150 Oryza glumaepatula OGLUM02G06150 I 0.814
OGLUM06G24120 Oryza glumaepatula OGLUM06G24120 I 0.814
OLONG_007261 Oryza longistaminata OLONG_007261 I 0.814
OLONG_008502 Oryza longistaminata OLONG_008502 I 0.814
OMERI02G07060 Oryza meridionalis OMERI02G07060 I 0.814
OMERI06G22830 Oryza meridionalis OMERI06G22830 I 0.814
ONIVA02G07170 Oryza nivara ONIVA02G07170 I 0.814
ONIVA06G27040 Oryza nivara ONIVA06G27040 I 0.814
OPUNC02G05410 Oryza punctata OPUNC02G05410 I 0.814
OPUNC02G05430 Oryza punctata OPUNC02G05430 I 0.814
OPUNC06G20620 Oryza punctata OPUNC06G20620 I 0.814
ORGLA02G0057000 Oryza glaberrima ORGLA02G0057000 I 0.814
ORGLA06G0191100 Oryza glaberrima ORGLA06G0191100 I 0.814
ORUFI02G06290 Oryza rufipogon ORUFI02G06290 I 0.814
ORUFI06G24530 Oryza rufipogon ORUFI06G24530 I 0.814
OS06G0649000 Oryza sativa OS06G0649000 I 0.814
POPTR_0018s02480 Populus trichocarpa POPTR_0018s02480 I 0.814
Sb02g024765 Sorghum bicolor Sb02g024765 I 0.814
Sb04g005520 Sorghum bicolor Sb04g005520 I 0.814
Si006914m.g Setaria italica Si006914m.g I 0.814
Si017443m.g Setaria italica Si017443m.g I 0.814
Traes_6AS_DA75BB1FD Triticum aestivum Traes_6AS_DA75BB1FD I 0.814
Traes_6DS_8F684013D Triticum aestivum Traes_6DS_8F684013D I 0.814
evm.TU.supercontig_127.27 Carica papaya evm.TU.supercontig_127.27 I 0.814
Pavir.Aa03147 Panicum virgatum Pavir.Aa03147 I 0.814
Pavir.Da00323 Panicum virgatum Pavir.Da00323 I 0.814
Pavir.J15967 Panicum virgatum Pavir.J15967 I 0.814
Pavir.J39636 Panicum virgatum Pavir.J39636 I 0.814
SapurV1A.0372s0170 Salix purpurea SapurV1A.0372s0170 I 0.814
Bo6g080740 Brassica oleracea Bo6g080740 I 0.813
GLYMA10G13720 Glycine max GLYMA10G13720 I 0.813
GSMUA_Achr10G24080_001 Musa acuminata GSMUA_Achr10G24080_001 I 0.813
PRUPE_ppa009939mg Prunus persica PRUPE_ppa009939mg I 0.813
Solyc12g042590.1 Solanum lycopersicum Solyc12g042590.1 I 0.813
Pm005697 Prunus mume Pm005697 I 0.813
29848.m004544 Ricinus communis 29848.m004544 I 0.813
GRMZM2G169149 Zea mays GRMZM2G169149 I 0.812
Eucgr.C01943 Eucalyptus grandis Eucgr.C01943 I 0.812
MTR_1g013790 Medicago truncatula MTR_1g013790 I 0.811
TCM_036912 Theobroma cacao TCM_036912 I 0.811
Gorai.009G062400 Gossypium raimondii Gorai.009G062400 I 0.811
GLYMA14G11920 Glycine max GLYMA14G11920 I 0.810
cassava8103.valid.m1 Manihot esculenta cassava8103.valid.m1 I 0.810
chr5.CM0040.550.nd Lotus japonicus chr5.CM0040.550.nd I 0.810
AC209050.3_FG003 Zea mays AC209050.3_FG003 I 0.809
F775_22247 Aegilops tauschii F775_22247 I 0.809
GLYMA17G33920 Glycine max GLYMA17G33920 I 0.809
VIT_04s0008g05750 Vitis vinifera VIT_04s0008g05750 I 0.809
Ca_09101 Cicer arietinum Ca_09101 I 0.808