orange1.1g041468m.g (Citrus sinensis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 orange1.1g041468m.g T356666_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.818 0.542
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g041468m WRKY 26 86

Links

Other WRKY family TFs
Other Citrus sinensis TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g048870.1 Solanum lycopersicum Solyc06g048870.1 I 0.833
POPTR_0019s08730 Populus trichocarpa POPTR_0019s08730 I 0.830
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.829
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.828
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I 0.826
Pm019076 Prunus mume Pm019076 I 0.826
cassava8741.m1 Manihot esculenta cassava8741.m1 I 0.826
Bra016975 Brassica rapa Bra016975 I 0.825
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.825
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.824
cassava26362.m1 Manihot esculenta cassava26362.m1 I 0.824
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.822
29729.m002370 Ricinus communis 29729.m002370 I 0.822
Cucsa.143840 Cucumis sativus Cucsa.143840 I 0.822
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.822
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.822
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.821
Bo6g066790 Brassica oleracea Bo6g066790 I 0.821
MDP0000460139 Malus domestica MDP0000460139 I 0.821
Bo4g190380 Brassica oleracea Bo4g190380 I 0.820
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.820
mgf026576m Mimulus guttatus mgf026576m I 0.820
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.820
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.820
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.819
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.819
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.819
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.819
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.819
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.819
WRKY55 Arabidopsis thaliana AT2G40740 D 0.818
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.818
Cla007423 Citrullus lanatus Cla007423 I 0.818
Bra014693 Brassica rapa Bra014693 I 0.817
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.817
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.817
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.817
MDP0000828055 Malus domestica MDP0000828055 I 0.817
evm.TU.supercontig_19.45 Carica papaya evm.TU.supercontig_19.45 I 0.816
29729.m002330 Ricinus communis 29729.m002330 I 0.815
Bo3g035130 Brassica oleracea Bo3g035130 I 0.814
Bra000202 Brassica rapa Bra000202 I 0.814
TCM_045555 Theobroma cacao TCM_045555 I 0.814
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I 0.814
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.814
Traes_6AS_68775100B Triticum aestivum Traes_6AS_68775100B I 0.813
Bostr.20505s0113 Boechera stricta Bostr.20505s0113 I 0.813
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.812
TRIUR3_24602 Triticum urartu TRIUR3_24602 I 0.812
Bo4g114050 Brassica oleracea Bo4g114050 I 0.811
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.811
Bra013732 Brassica rapa Bra013732 I 0.810
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.810
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.809
Bo4g190390 Brassica oleracea Bo4g190390 I 0.809
Bra016974 Brassica rapa Bra016974 I 0.809
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.809
F775_02122 Aegilops tauschii F775_02122 I 0.809
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.809
GSMUA_Achr3G25080_001 Musa acuminata GSMUA_Achr3G25080_001 I 0.809
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.809
OBART05G11690 Oryza barthii OBART05G11690 I 0.809
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.809
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.809
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.809
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.809
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.809
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.809
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.809
OS05G0321900 Oryza sativa OS05G0321900 I 0.809
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.809
Si025307m.g Setaria italica Si025307m.g I 0.809
Eucgr.J02653 Eucalyptus grandis Eucgr.J02653 I 0.809
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.809
Sb02g011050 Sorghum bicolor Sb02g011050 I 0.808
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.808
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.808