CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00716
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_00716
T357934_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_00716T0
Zinc cluster
1
32
MKVKIKCDRHNPCSKCRAAKVDCSYPSGGERS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00716
Verticillium alfalfae
VDBG_00716
N
0.683
TRIVIDRAFT_40103
Trichoderma virens
TRIVIDRAFT_40103
N
0.556
CFIO01_00053
Colletotrichum fioriniae
CFIO01_00053
N
0.541
TRIVIDRAFT_28800
Trichoderma virens
TRIVIDRAFT_28800
N
0.540