CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_01908
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_01908
T357954_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_01908T0
Zinc cluster
16
57
RACDQCRIRKADERQIRCDKGTPCSNCRTALRSCSSIGVTHK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_01908
Verticillium alfalfae
VDBG_01908
N
0.683
NCU09974
Neurospora crassa
NCU09974
N
0.594
VHEMI05407
Torrubiella hemipterigena
VHEMI05407
N
0.592
FVEG_13097
Fusarium verticillioides
FVEG_13097
N
0.570
FOXG_15634
Fusarium oxysporum
FOXG_15634
N
0.570
ANIA_08164
Aspergillus nidulans
CADANIAG00004204
N
0.563
CTHT_0011190
Chaetomium thermophilum
CTHT_0011190
N
0.563
TRIATDRAFT_35132
Trichoderma atroviride
TRIATDRAFT_35132
N
0.563
M438DRAFT_278606
Aureobasidium pullulans
M438DRAFT_278606
N
0.552
AUEXF2481DRAFT_35771
Aureobasidium subglaciale
AUEXF2481DRAFT_35771
N
0.551
M437DRAFT_58120
Aureobasidium melanogenum
M437DRAFT_58120
N
0.549
EURHEDRAFT_408891
Aspergillus ruber
EURHEDRAFT_408891
N
0.547
estExt_Genewise1Plus.C_110207
Cryphonectria parasitica
estExt_Genewise1Plus.C_110207
N
0.545
ACRE_067040
Acremonium chrysogenum
ACRE_067040
N
0.544
MGG_09027
Magnaporthe oryzae
MGG_09027
N
0.541