CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_02233
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_02233
T357958_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_02233T0
Zinc cluster
45
84
AGCKYCRDKRKKCSEEKPRCSRCVQFGVECVYEPIKKRKK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_02233
Verticillium alfalfae
VDBG_02233
N
0.683
CSUB01_11840
Colletotrichum sublineola
CSUB01_11840
N
0.636
GLRG_07664
Colletotrichum graminicola
GLRG_07664
N
0.636
CH063_02730
Colletotrichum higginsianum
CH063_02730
N
0.628