CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03227
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_03227
T357976_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03227T0
Zinc cluster
29
58
LACNGCRRRKLRCSREVPTCQQCRKINALE
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_03227
Verticillium alfalfae
VDBG_03227
N
0.683
VDBG_10059
Verticillium albo atrum
VDBG_10059
N
0.614
CFIO01_12255
Colletotrichum fioriniae
CFIO01_12255
N
0.614
VDAG_05362
Verticillium dahliae
VDAG_05362
N
0.614
VDBG_10059
Verticillium alfalfae
VDBG_10059
N
0.614
CH063_11479
Colletotrichum higginsianum
CH063_11479
N
0.554
Cob_02208
Colletotrichum orbiculare
Cob_02208
N
0.554
CGGC5_1323
Colletotrichum gloeosporioides
CGGC5_1323
N
0.546
GGTG_10662
Gaeumannomyces graminis
GGTG_10662
N
0.545