CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03794
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_03794
T357986_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03794T0
Zinc cluster
20
57
QACGTCKRQKRKCDKALPSCGLCVRMRRHCDYTDAVPA
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_01022
Verticillium dahliae
VDAG_01022
N
0.683
VDBG_03794
Verticillium alfalfae
VDBG_03794
N
0.683
Bcin05g01400
Botrytis cinerea
Bcin05g01400
N
0.551
SBOR_0618
Sclerotinia borealis
SBOR_0618
N
0.551
SS1G_05931
Sclerotinia sclerotiorum
SS1G_05931
N
0.551
CGGC5_5418
Colletotrichum gloeosporioides
CGGC5_5418
N
0.539