CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_06548
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_06548
T358025_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_06548T0
Zinc cluster
17
53
TGCMKCRTRRRKCDEEKPKCRRCIEGGFDCQYGPRLT
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_05088
Verticillium dahliae
VDAG_05088
N
0.683
VDBG_06548
Verticillium alfalfae
VDBG_06548
N
0.683
PCH_Pc14g00210
Penicillium rubens
PCH_Pc14g00210
N
0.589
Pc14g00210
Penicillium chrysogenum
Pc14g00210
N
0.589
HMPREF1541_10222
Cyphellophora europaea
HMPREF1541_10222
N
0.569
A1O9_04027
Exophiala aquamarina
A1O9_04027
N
0.551
Cob_08795
Colletotrichum orbiculare
Cob_08795
N
0.549