CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_09558
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_09558
T358068_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_09558T0
Zinc cluster
93
131
EGCLTCKRRKVKCDEQRPRCSHCERLNLECKWRPQSSIS
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_04789
Verticillium dahliae
VDAG_04789
N
0.683
VDBG_09558
Verticillium alfalfae
VDBG_09558
N
0.683
F503_06182
Ophiostoma piceae uamh
F503_06182
N
0.610
NechaG96944
Fusarium solani
NechaG96944
N
0.595
FFUJ_13799
Fusarium fujikuroi
FFUJ_13799
N
0.595
fgenesh1_pm.sca_14_chr10_3_0000138
Nectria haematococca
fgenesh1_pm.sca_14_chr10_3_0000138
N
0.595
TRIREDRAFT_54502
Trichoderma reesei
TRIREDRAFT_54502
N
0.550
gw1.9.186.1
Cryphonectria parasitica
gw1.9.186.1
I
0.548
TRIATDRAFT_288607
Trichoderma atroviride
TRIATDRAFT_288607
N
0.548
TRIVIDRAFT_51228
Trichoderma virens
TRIVIDRAFT_51228
N
0.548