CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CMQ_6488
(
Grosmannia clavigera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CMQ_6488
T364224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU04827
M02606_2.00
Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7813
0.547
0.775
NCU04827
M02607_2.00
Neurospora crassa
NNNVCGGN
NCCGBNNN
PBM
Weirauch et al.(2014)
pTH8930
0.547
0.775
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX01546
Zinc cluster
170
211
RACDACRRKKIKCDSVSEAEQCSNCRRSHVSCLFSRVPQKRG
Links
Other
Zinc cluster
family TFs
Other
Grosmannia clavigera
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F503_05587
Ophiostoma piceae uamh
F503_05587
N
0.636
GGTG_07708
Gaeumannomyces graminis
GGTG_07708
N
0.604
PV09_08080
Verruconis gallopava
PV09_08080
N
0.596
fgenesh1_pg.C_scaffold_9000142
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_9000142
I
0.584
HMPREF1624_02358
Sporothrix schenckii
HMPREF1624_02358
I
0.570
SPBR_02265
Sporothrix brasiliensis
SPBR_02265
I
0.570
CHGG_08910
Chaetomium globosum
CHGG_08910
I
0.548
NCU04827
Neurospora crassa
NCU04827
D
0.547
estExt_fgenesh2_pg.C_60189
Neurospora discreta
estExt_fgenesh2_pg.C_60189
I
0.547
NEUTE1DRAFT_50286
Neurospora tetrasperma
NEUTE1DRAFT_50286
I
0.547
CTHT_0043170
Chaetomium thermophilum
CTHT_0043170
I
0.547
MYCTH_2307005
Myceliophthora thermophila
MYCTH_2307005
I
0.547
PODANS_4_9410
Podospora anserina
PODANS_4_9410
I
0.547
SMAC_03466
Sordaria macrospora
SMAC_03466
I
0.547