CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cob_05607
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_05607
T364433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01678
M01396_2.00
Aspergillus nidulans
NKCGGRDNN
NNHYCCGMN
PBM
Lambert et al.(2019)
pEX0273
0.558
0.579
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH86097
Zinc cluster
145
182
RACDRCKKRKIRCTGIQPCELCVRTESHCTYNASYARG
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_01161
Colletotrichum fioriniae
CFIO01_01161
N
0.659
CGGC5_3627
Colletotrichum gloeosporioides
CGGC5_3627
N
0.659
CH063_11452
Colletotrichum higginsianum
CH063_11452
N
0.659
GLRG_09726
Colletotrichum graminicola
GLRG_09726
N
0.659
VDAG_01704
Verticillium dahliae
VDAG_01704
N
0.614
PFICI_09828
Pestalotiopsis fici
PFICI_09828
I
0.573
HMPREF1120_04365
Exophiala dermatitidis
HMPREF1120_04365
N
0.570
TSTA_025050
Talaromyces stipitatus
TSTA_025050
N
0.569
CCM_08245
Cordyceps militaris
CCM_08245
N
0.565
EURHEDRAFT_451742
Aspergillus ruber
EURHEDRAFT_451742
I
0.561
fgenesh1_pm.00042_#_4
Aspergillus carbonarius
fgenesh1_pm.00042_#_4
I
0.561
ANIA_01678
Aspergillus nidulans
CADANIAG00008319
D
0.558
SAPIO_CDS8755
Scedosporium apiospermum
SAPIO_CDS8755
N
0.558
CMQ_5495
Grosmannia clavigera
CMQ_5495
I
0.554
COCCADRAFT_40704
Bipolaris zeicola
COCCADRAFT_40704
I
0.544
COCMIDRAFT_48551
Bipolaris oryzae
COCMIDRAFT_48551
I
0.544
COCSADRAFT_143282
Bipolaris sorokiniana
COCSADRAFT_143282
I
0.544
COCVIDRAFT_39465
Bipolaris victoriae
COCVIDRAFT_39465
I
0.544
NechaG12083
Fusarium solani
NechaG12083
I
0.543
gw1.27.206.1
Nectria haematococca
gw1.27.206.1
I
0.543
A1O1_08296
Capronia coronata
A1O1_08296
I
0.541
OIDMADRAFT_181577
Oidiodendron maius
OIDMADRAFT_181577
N
0.541
AUEXF2481DRAFT_433573
Aureobasidium subglaciale
AUEXF2481DRAFT_433573
N
0.540
M438DRAFT_69086
Aureobasidium pullulans
M438DRAFT_69086
N
0.540
S40288_09024
Stachybotrys chartarum
S40288_09024
N
0.540
VDBG_07788
Verticillium albo atrum
VDBG_07788
N
0.539
VDAG_09653
Verticillium dahliae
VDAG_09653
N
0.539
VDBG_07788
Verticillium alfalfae
VDBG_07788
N
0.539