CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DDB_G0270590
(
Dictyostelium discoideum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
DDB_G0270590
T366216_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DDB_G0270590
M02575_2.00
Dictyostelium discoideum
YCGGNNNNN
NNNNNCCGR
PBM
Weirauch et al.(2014)
pTH5343
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02575_2.00
Zinc cluster
4
43
RACLNCRSSKVACDHQRPCVRCTKNGTEDTCRDVPRKPKV
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0220624
Zinc cluster
176
215
RACLNCRSSKVACDHQRPCVRCTKNGTEDTCRDVPRKPKV
Links
Other
Zinc cluster
family TFs
Other
Dictyostelium discoideum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFA81495.1
Polysphondylium pallidum
EFA81495.1
I
0.592