CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc13g10310
(
Penicillium rubens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PCH_Pc13g10310
T377092_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_04933
M01371_2.00
Aspergillus nidulans
HCGGNNNNNN
NNNNNNCCGD
PBM
Lambert et al.(2019)
pEX0234
0.624
0.816
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP92100
Zinc cluster
20
58
TACENCRQSKVKCNLSGKSVCTRCLRHGLQCQYGFANRS
Links
Other
Zinc cluster
family TFs
Other
Penicillium rubens
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
U727_00434351441
Penicillium solitum
U727_00434351441
I
0.683
Pc13g10310
Penicillium chrysogenum
Pc13g10310
I
0.683
ANIA_04933
Aspergillus nidulans
CADANIAG00005464
D
0.624
PDE_04733
Penicillium oxalicum
PDE_04733
I
0.618
CADAFLAG00002590
Aspergillus flavus
CADAFLAG00002590
I
0.609
ACLA_038450
Aspergillus clavatus
CADACLAG00003387
I
0.579
AFUA_3G10560
Aspergillus fumigatus
CADAFUAG00005222
I
0.579
ATEG_04585
Aspergillus terreus
CADATEAG00006929
I
0.579
NFIA_066730
Neosartorya fischeri
CADNFIAG00005951
I
0.579
fgenesh1_pg.00714_#_7
Aspergillus carbonarius
fgenesh1_pg.00714_#_7
I
0.579
CADANGAG00012924
Aspergillus niger
CADANGAG00012924
I
0.555