CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFICI_12806
(
Pestalotiopsis fici
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PFICI_12806
T378066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06521
M02615_2.00
Neurospora crassa
RKCGGAGT
ACTCCGMY
PBM
Weirauch et al.(2014)
pTH8952
0.547
0.806
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS75862
Zinc cluster
85
117
RACARCRRLQKGCSESRPCQRCIRTGLAEQCLA
Links
Other
Zinc cluster
family TFs
Other
Pestalotiopsis fici
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_78353
Neurospora tetrasperma
NEUTE1DRAFT_78353
I
0.547
SMAC_03078
Sordaria macrospora
SMAC_03078
I
0.547
estExt_fgenesh2_pg.C_30724
Neurospora discreta
estExt_fgenesh2_pg.C_30724
I
0.547
NCU06521
Neurospora crassa
NCU06521
D
0.547