CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_063340
(
Talaromyces marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PMAA_063340
T379188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_07189
M01330_2.00
Aspergillus nidulans
NDKCGGNN
NNCCGMHN
PBM
Lambert et al.(2019)
pEX0193
0.541
0.784
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEA25215
Zinc cluster
942
978
TACEFCRKRKKKCDFQYPNCSACTRAGVVCTVLTLGQ
Links
Other
Zinc cluster
family TFs
Other
Talaromyces marneffei
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TSTA_082810
Talaromyces stipitatus
TSTA_082810
I
0.683
PMAA_063340
Penicillium marneffei
PMAA_063340
I
0.683
PVAR5_3377
Byssochlamys spectabilis
PVAR5_3377
I
0.637
AFUA_6G10140
Aspergillus fumigatus
CADAFUAG00002354
I
0.541
ANIA_07189
Aspergillus nidulans
CADANIAG00000265
D
0.541
NFIA_055920
Neosartorya fischeri
CADNFIAG00004495
I
0.541