CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04632
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_04632
T387509_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
adv-1
M02624_2.00
Neurospora crassa
VGCGSYWMN
NKWRSCGCB
PBM
Weirauch et al.(2014)
pTH9685
0.645
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY18523
Zinc cluster
32
70
TGCYTCRLRRKKCDEGTPHCTACKHLGLQCEYKRPMWWS
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_04632
Verticillium albo atrum
VDBG_04632
I
0.683
FFUJ_02785
Fusarium fujikuroi
FFUJ_02785
I
0.676
FGRRES_07067
Fusarium graminearum
FGRRES_07067
I
0.676
FOXG_01740
Fusarium oxysporum
FOXG_01740
I
0.676
FPSE_02717
Fusarium pseudograminearum
FPSE_02717
I
0.676
FVEG_08110
Fusarium verticillioides
FVEG_08110
I
0.676
TRIVIDRAFT_64402
Trichoderma virens
TRIVIDRAFT_64402
I
0.676
NechaG92660
Fusarium solani
NechaG92660
I
0.675
S40285_00766
Stachybotrys chlorohalonata
S40285_00766
I
0.675
S40288_04952
Stachybotrys chartarum
S40288_04952
I
0.675
SMAC_00338
Sordaria macrospora
SMAC_00338
I
0.675
TRIATDRAFT_135729
Trichoderma atroviride
TRIATDRAFT_135729
I
0.675
fgenesh1_pm.sca_3_chr4_2_0000275
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000275
I
0.675
CPUR_07866
Claviceps purpurea
CPUR_07866
I
0.652
MAM_05720
Metarhizium album
MAM_05720
I
0.652
UV8b_4390
Ustilaginoidea virens
UV8b_4390
I
0.652
MYCTH_2295908
Myceliophthora thermophila
MYCTH_2295908
I
0.650
TRIREDRAFT_76590
Trichoderma reesei
TRIREDRAFT_76590
I
0.646
UCREL1_10866
Eutypa lata
UCREL1_10866
I
0.646
CHGG_00993
Chaetomium globosum
CHGG_00993
I
0.645
GGTG_01417
Gaeumannomyces graminis
GGTG_01417
I
0.645
MAPG_06641
Magnaporthe poae
MAPG_06641
I
0.645
NEUTE1DRAFT_125804
Neurospora tetrasperma
NEUTE1DRAFT_125804
I
0.645
OIDMADRAFT_115392
Oidiodendron maius
OIDMADRAFT_115392
I
0.645
THITE_2113863
Thielavia terrestris
THITE_2113863
I
0.645
estExt_Genewise1.C_40883
Neurospora discreta
estExt_Genewise1.C_40883
I
0.645
adv-1
Neurospora crassa
NCU07392
D
0.645
estExt_Genewise1Plus.C_40892
Cryphonectria parasitica
estExt_Genewise1Plus.C_40892
I
0.645
ACRE_018490
Acremonium chrysogenum
ACRE_018490
I
0.644
PFICI_01836
Pestalotiopsis fici
PFICI_01836
I
0.644
M438DRAFT_406206
Aureobasidium pullulans
M438DRAFT_406206
I
0.633
BGHDH14_bgh02455
Blumeria graminis
BGHDH14_bgh02455
I
0.628
CFIO01_13377
Colletotrichum fioriniae
CFIO01_13377
I
0.628
CGGC5_9983
Colletotrichum gloeosporioides
CGGC5_9983
I
0.628
Cob_04296
Colletotrichum orbiculare
Cob_04296
I
0.628
CSUB01_00309
Colletotrichum sublineola
CSUB01_00309
I
0.628
GLRG_01448
Colletotrichum graminicola
GLRG_01448
I
0.628
SAPIO_CDS3424
Scedosporium apiospermum
SAPIO_CDS3424
I
0.628
F503_07739
Ophiostoma piceae uamh
F503_07739
I
0.622
MBM_06136
Marssonina brunnea
MBM_06136
I
0.622
X797_004221
Metarhizium robertsii
X797_004221
I
0.622
CMQ_1089
Grosmannia clavigera
CMQ_1089
I
0.621
CTHT_0066850
Chaetomium thermophilum
CTHT_0066850
I
0.620
GMDG_04129
Pseudogymnoascus destructans
GMDG_04129
I
0.611
V499_09066
Pseudogymnoascus pannorum
V499_09066
I
0.611
Bcin01g10880
Botrytis cinerea
Bcin01g10880
I
0.605
MGG_00494
Magnaporthe oryzae
MGG_00494
I
0.605
AUEXF2481DRAFT_2961
Aureobasidium subglaciale
AUEXF2481DRAFT_2961
I
0.603
HMPREF1624_08094
Sporothrix schenckii
HMPREF1624_08094
I
0.603
M437DRAFT_47042
Aureobasidium melanogenum
M437DRAFT_47042
I
0.603
SPBR_03426
Sporothrix brasiliensis
SPBR_03426
I
0.603
SBOR_7426
Sclerotinia borealis
SBOR_7426
I
0.602
VHEMI02616
Torrubiella hemipterigena
VHEMI02616
I
0.602
MPH_07854
Macrophomina phaseolina
MPH_07854
N
0.561
UCRNP2_4393
Neofusicoccum parvum
UCRNP2_4393
N
0.561
COCC4DRAFT_71571
Bipolaris maydis
COCC4DRAFT_71571
I
0.556
COCCADRAFT_2138
Bipolaris zeicola
COCCADRAFT_2138
I
0.556
COCMIDRAFT_101771
Bipolaris oryzae
COCMIDRAFT_101771
I
0.556
COCSADRAFT_95191
Bipolaris sorokiniana
COCSADRAFT_95191
I
0.556
COCVIDRAFT_33542
Bipolaris victoriae
COCVIDRAFT_33542
I
0.556
PTRG_02861
Pyrenophora triticirepentis
PTRG_02861
I
0.556
PTT_14613
Pyrenophora teres
PTT_14613
I
0.556
SETTUDRAFT_166291
Setosphaeria turcica
SETTUDRAFT_166291
I
0.556
estExt_Genewise1.C_140356
Cochliobolus heterostrophus C5
estExt_Genewise1.C_140356
I
0.556
SCHCODRAFT_114874
Schizophyllum commune
SCHCODRAFT_114874
N
0.553
EV44_g2524
Erysiphe necator
EV44_g2524
I
0.551