CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_110611
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_110611
T389857_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-24
M01425_2.00
Neurospora crassa
BCGGYTAW
WTARCCGV
PBM
Lambert et al.(2019)
pTH8934
0.666
0.947
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_110611
Zinc cluster
132
168
RACDACHGRRQKCQGFQPCANCIKKGVECTYNNPYYR
estExt_Genewise1Plus.C_110611
Zinc cluster
205
243
RACDICRDGRHPCSGTLPCGRCFSTRQECTYKTRNSRNR
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_84377
Neurospora tetrasperma
NEUTE1DRAFT_84377
I
0.666
col-24
Neurospora crassa
NCU05383
D
0.666
SMAC_04135
Sordaria macrospora
SMAC_04135
I
0.651